Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RFX4Q33E94 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RFX4Q33E94 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RFX4Q33E94 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RFX4Q33E94 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 RPL7P60-201ENST00000397636 735 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 AC008173.1-201ENST00000418901 264 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.24□□□□□ -1.89
RFX4Q33E94 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.24□□□□□ -1.89
RFX4Q33E94 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.24□□□□□ -1.89
RFX4Q33E94 AC004975.1-201ENST00000428733 208 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 FTH1P1-201ENST00000437933 532 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 AP000949.1-201ENST00000438328 629 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.24□□□□□ -1.89
RFX4Q33E94 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.24□□□□□ -1.89
RFX4Q33E94 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.24□□□□□ -1.89
RFX4Q33E94 DNAJC19P8-201ENST00000452887 259 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 AL035407.2-201ENST00000454090 378 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 RPS20P21-201ENST00000466859 343 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 AC104689.1-201ENST00000473356 768 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 UBE2NP1-201ENST00000545592 458 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.24□□□□□ -1.89
RFX4Q33E94 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.24□□□□□ -1.89
RFX4Q33E94 AC087499.8-201ENST00000578406 226 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.24□□□□□ -1.89
RFX4Q33E94 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.24□□□□□ -1.89
RFX4Q33E94 AP003400.6-201ENST00000624698 740 ntBASIC3.24□□□□□ -1.89
RFX4Q33E94 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.24□□□□□ -1.89
RFX4Q33E94 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.24□□□□□ -1.89
RFX4Q33E94 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RFX4Q33E94 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.24□□□□□ -1.89
RFX4Q33E94 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.23□□□□□ -1.89
RFX4Q33E94 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.23□□□□□ -1.89
RFX4Q33E94 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
RFX4Q33E94 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFX4Q33E94 RPL22P22-201ENST00000395439 379 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFX4Q33E94 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.23□□□□□ -1.89
RFX4Q33E94 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.23□□□□□ -1.89
RFX4Q33E94 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.23□□□□□ -1.89
RFX4Q33E94 OR4F13P-201ENST00000428478 931 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 AC093422.3-201ENST00000428506 305 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.23□□□□□ -1.89
RFX4Q33E94 UBE2V1P6-201ENST00000430840 422 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 AL512637.2-201ENST00000431287 1256 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 FABP5P3-201ENST00000437960 408 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 AL158053.1-201ENST00000441503 453 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.23□□□□□ -1.89
RFX4Q33E94 MOB1AP2-201ENST00000446060 614 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.23□□□□□ -1.89
RFX4Q33E94 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.23□□□□□ -1.89
RFX4Q33E94 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.23□□□□□ -1.89
RFX4Q33E94 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RFX4Q33E94 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.23□□□□□ -1.89
RFX4Q33E94 AC093853.1-201ENST00000515689 483 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 SNORA26.10-201ENST00000516427 141 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.23□□□□□ -1.89
RFX4Q33E94 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RFX4Q33E94 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.23□□□□□ -1.89
RFX4Q33E94 MTND4LP25-201ENST00000570218 163 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.23□□□□□ -1.89
RFX4Q33E94 AL392112.1-201ENST00000605115 829 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 AC092574.1-201ENST00000609771 420 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 AC099778.2-201ENST00000610904 211 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 AC106730.3-201ENST00000624568 641 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 AL590396.2-201ENST00000636511 1041 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.23□□□□□ -1.89
RFX4Q33E94 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RFX4Q33E94 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFX4Q33E94 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RFX4Q33E94 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFX4Q33E94 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFX4Q33E94 SEC63P2-201ENST00000503863 1939 ntBASIC3.23□□□□□ -1.89
RFX4Q33E94 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RFX4Q33E94 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
RFX4Q33E94 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.22□□□□□ -1.89
RFX4Q33E94 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RFX4Q33E94 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RFX4Q33E94 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.22□□□□□ -1.89
RFX4Q33E94 SRP72P2-201ENST00000344851 1979 ntBASIC3.22□□□□□ -1.89
RFX4Q33E94 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RFX4Q33E94 AL079305.1-201ENST00000623159 3008 ntBASIC3.22□□□□□ -1.89
RFX4Q33E94 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.22□□□□□ -1.89
RFX4Q33E94 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
RFX4Q33E94 RN7SKP227-201ENST00000364445 330 ntBASIC3.22□□□□□ -1.89
RFX4Q33E94 RNU6-1293P-201ENST00000384077 107 ntBASIC3.22□□□□□ -1.89
RFX4Q33E94 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RFX4Q33E94 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.22□□□□□ -1.89
RFX4Q33E94 FO393414.1-201ENST00000428697 1184 ntBASIC3.22□□□□□ -1.89
RFX4Q33E94 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.22□□□□□ -1.89
RFX4Q33E94 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.22□□□□□ -1.89
RFX4Q33E94 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.22□□□□□ -1.89
RFX4Q33E94 AL096829.2-201ENST00000446582 742 ntBASIC3.22□□□□□ -1.89
RFX4Q33E94 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.22□□□□□ -1.89
RFX4Q33E94 AC008264.1-201ENST00000447612 367 ntBASIC3.22□□□□□ -1.89
RFX4Q33E94 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.22□□□□□ -1.89
RFX4Q33E94 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.22□□□□□ -1.89
RFX4Q33E94 RPL29P29-201ENST00000448725 423 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms