Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MYL8P-204ENST00000431574 518 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 SNX18P26-201ENST00000458433 740 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AL049714.1-201ENST00000466686 347 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 RPS27P23-201ENST00000487608 251 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 SCARNA16.2-201ENST00000516520 172 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 IGKV2-18-201ENST00000522607 343 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 MTND4P7-201ENST00000523876 130 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 IGLV3-6-201ENST00000523937 250 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC090502.2-201ENST00000549267 280 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC091078.2-201ENST00000557145 559 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AL356432.3-201ENST00000568952 465 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AL589674.2-201ENST00000604304 337 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 MZT1P2-201ENST00000604387 248 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 MIR7973-1-201ENST00000614683 76 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC116667.2-201ENST00000641075 823 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC027287.1-201ENST00000553115 1453 ntBASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTC1Q2NKJ3 AC009779.8-201ENST00000641684 4384 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 RNA5SP132-201ENST00000364725 118 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 RNU6-81P-201ENST00000365608 104 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 Y_RNA.518-201ENST00000384552 113 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 RNU1-149P-201ENST00000390870 161 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AL136131.1-201ENST00000406079 803 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 Y_RNA.793-201ENST00000411222 111 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 RPS6P23-201ENST00000413224 722 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 RPL7P2-201ENST00000427639 268 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 PPIAP10-201ENST00000438675 458 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC004801.2-202ENST00000463559 283 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 RN7SL165P-201ENST00000477476 291 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC092865.4-201ENST00000477936 615 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC108860.1-201ENST00000484521 383 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 RPL23AP72-201ENST00000492447 435 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 HIGD1AP13-201ENST00000509878 289 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AP001858.2-201ENST00000536213 601 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC025884.1-201ENST00000556034 378 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 OR4H6P-201ENST00000563771 921 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC018552.3-201ENST00000567416 561 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC015720.2-201ENST00000567709 334 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 MIR4700-201ENST00000578311 74 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC022884.3-201ENST00000579571 248 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC233702.7-202ENST00000582941 211 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 ATP5A1P2-202ENST00000616464 443 ntBASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms