Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.38□□□□□ -2.03
CKS1BP61024 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CKS1BP61024 LSM1P1-201ENST00000438629 273 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 ISCA1P2-201ENST00000438679 421 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 AC074367.1-201ENST00000438685 1125 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.38□□□□□ -2.03
CKS1BP61024 CDC27P1-201ENST00000445384 715 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 BUD31P2-201ENST00000449374 300 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 HMGB1P26-201ENST00000452520 628 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.38□□□□□ -2.03
CKS1BP61024 AP002345.1-201ENST00000456493 928 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.38□□□□□ -2.03
CKS1BP61024 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CKS1BP61024 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.38□□□□□ -2.03
CKS1BP61024 AC010460.1-201ENST00000507087 466 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.38□□□□□ -2.03
CKS1BP61024 HMGN1P11-201ENST00000508668 303 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.38□□□□□ -2.03
CKS1BP61024 MIR2116-201ENST00000517221 80 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.38□□□□□ -2.03
CKS1BP61024 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.38□□□□□ -2.03
CKS1BP61024 DUXAP6-201ENST00000553858 601 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.38□□□□□ -2.03
CKS1BP61024 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.38□□□□□ -2.03
CKS1BP61024 AC012119.1-201ENST00000603184 222 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 AP000787.2-201ENST00000604432 568 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 AL591034.3-201ENST00000605511 685 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 AC069209.1-201ENST00000619282 651 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.38□□□□□ -2.03
CKS1BP61024 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.38□□□□□ -2.03
CKS1BP61024 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.38□□□□□ -2.03
CKS1BP61024 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
CKS1BP61024 GABRG2-229ENST00000641017 3628 ntBASIC2.38□□□□□ -2.03
CKS1BP61024 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CKS1BP61024 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CKS1BP61024 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CKS1BP61024 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CKS1BP61024 SPRR2C-201ENST00000290702 219 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
CKS1BP61024 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.37□□□□□ -2.03
CKS1BP61024 AL139095.1-201ENST00000404326 391 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 HMGB3P18-201ENST00000406327 590 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.37□□□□□ -2.03
CKS1BP61024 RNA5SP38-201ENST00000410750 119 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 RANP4-201ENST00000413361 655 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 AC234782.4-201ENST00000417646 1048 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.37□□□□□ -2.03
CKS1BP61024 AC006960.1-201ENST00000419980 153 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.37□□□□□ -2.03
CKS1BP61024 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.37□□□□□ -2.03
CKS1BP61024 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.37□□□□□ -2.03
CKS1BP61024 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.37□□□□□ -2.03
CKS1BP61024 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CKS1BP61024 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.37□□□□□ -2.03
CKS1BP61024 GSTA11P-201ENST00000452866 669 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.37□□□□□ -2.03
CKS1BP61024 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.37□□□□□ -2.03
CKS1BP61024 AC091564.1-201ENST00000464563 479 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 RN7SL594P-201ENST00000470590 287 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 OR5H3P-201ENST00000502817 919 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.37□□□□□ -2.03
CKS1BP61024 AC034244.2-201ENST00000514668 858 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 SNORA31.15-201ENST00000516771 132 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 RNU6-1308P-201ENST00000516817 103 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.37□□□□□ -2.03
CKS1BP61024 IGKV2-36-201ENST00000519999 223 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.37□□□□□ -2.03
CKS1BP61024 AC104115.2-201ENST00000523026 687 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 OR4A45P-201ENST00000529954 901 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.37□□□□□ -2.03
CKS1BP61024 MIR548Y-201ENST00000582739 110 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.37□□□□□ -2.03
CKS1BP61024 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.37□□□□□ -2.03
CKS1BP61024 MIR6820-201ENST00000611508 62 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 AC022149.2-201ENST00000621061 203 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.37□□□□□ -2.03
CKS1BP61024 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CKS1BP61024 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
CKS1BP61024 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CKS1BP61024 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CKS1BP61024 FAM35BP-202ENST00000497389 3337 ntBASIC2.37□□□□□ -2.03
CKS1BP61024 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.37□□□□□ -2.03
CKS1BP61024 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.36□□□□□ -2.03
CKS1BP61024 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.36□□□□□ -2.03
CKS1BP61024 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CKS1BP61024 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.36□□□□□ -2.03
CKS1BP61024 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CKS1BP61024 AL121657.1-201ENST00000327215 531 ntBASIC2.36□□□□□ -2.03
CKS1BP61024 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CKS1BP61024 NACA3P-201ENST00000359690 648 ntBASIC2.36□□□□□ -2.03
CKS1BP61024 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.36□□□□□ -2.03
CKS1BP61024 RNU6-213P-201ENST00000384051 104 ntBASIC2.36□□□□□ -2.03
CKS1BP61024 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CKS1BP61024 AL121972.1-201ENST00000402023 252 ntBASIC2.36□□□□□ -2.03
CKS1BP61024 AL356057.2-201ENST00000403318 432 ntBASIC2.36□□□□□ -2.03
CKS1BP61024 GSTA8P-201ENST00000404253 637 ntBASIC2.36□□□□□ -2.03
CKS1BP61024 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.36□□□□□ -2.03
CKS1BP61024 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.36□□□□□ -2.03
CKS1BP61024 BTF3P9-201ENST00000418784 283 ntBASIC2.36□□□□□ -2.03
CKS1BP61024 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms