Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SPCS3P61009 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SPCS3P61009 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SPCS3P61009 MIR372-201ENST00000362225 67 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 RPL32P23-201ENST00000397237 405 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 RPL7P60-201ENST00000397636 735 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 RAP1BP1-201ENST00000412709 553 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 SSXP9-201ENST00000417503 292 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 AC005517.2-201ENST00000424673 553 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.8□□□□□ -1.96
SPCS3P61009 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.8□□□□□ -1.96
SPCS3P61009 RPL23AP58-201ENST00000440453 469 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.8□□□□□ -1.96
SPCS3P61009 RPL39P40-201ENST00000445481 146 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SPCS3P61009 Z99714.1-201ENST00000450463 807 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SPCS3P61009 RN7SL132P-201ENST00000478131 296 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 AC107398.1-201ENST00000486904 505 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 RPL21P131-201ENST00000497298 483 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 AC111000.2-201ENST00000507775 550 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.8□□□□□ -1.96
SPCS3P61009 AC093853.1-201ENST00000515689 483 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 MIR2276-201ENST00000516886 89 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 MIR2116-201ENST00000517221 80 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 AC104027.1-201ENST00000521887 300 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.8□□□□□ -1.96
SPCS3P61009 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.8□□□□□ -1.96
SPCS3P61009 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.8□□□□□ -1.96
SPCS3P61009 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
SPCS3P61009 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.8□□□□□ -1.96
SPCS3P61009 AL023583.1-201ENST00000607518 1143 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 AC069234.5-201ENST00000611056 416 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 AC090897.3-201ENST00000636973 1157 ntBASIC2.8□□□□□ -1.96
SPCS3P61009 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.8□□□□□ -1.96
SPCS3P61009 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SPCS3P61009 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SPCS3P61009 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.79□□□□□ -1.96
SPCS3P61009 RNU6-1181P-201ENST00000384191 106 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SPCS3P61009 RNU6-628P-201ENST00000410675 107 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SPCS3P61009 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 AL390023.1-201ENST00000428836 262 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.79□□□□□ -1.96
SPCS3P61009 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.79□□□□□ -1.96
SPCS3P61009 AC008264.1-201ENST00000447612 367 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.79□□□□□ -1.96
SPCS3P61009 AL024509.2-201ENST00000493462 493 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.79□□□□□ -1.96
SPCS3P61009 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.79□□□□□ -1.96
SPCS3P61009 RNA5SP468-201ENST00000516782 93 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 AP003717.3-201ENST00000544832 1180 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.79□□□□□ -1.96
SPCS3P61009 POLR2KP1-201ENST00000553226 168 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 MIR4286-201ENST00000580651 93 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.79□□□□□ -1.96
SPCS3P61009 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.79□□□□□ -1.96
SPCS3P61009 AC090912.3-201ENST00000609775 533 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 AL359198.2-201ENST00000611836 194 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 MIR6875-201ENST00000617506 72 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 AP003122.6-201ENST00000623831 495 ntBASIC2.79□□□□□ -1.96
SPCS3P61009 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.79□□□□□ -1.96
SPCS3P61009 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
SPCS3P61009 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SPCS3P61009 AC032011.1-201ENST00000611703 1549 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SPCS3P61009 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.78□□□□□ -1.96
SPCS3P61009 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.78□□□□□ -1.96
SPCS3P61009 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SPCS3P61009 FRG1CP-201ENST00000358464 769 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 RNA5SP283-201ENST00000365604 119 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 MTND4P13-201ENST00000402078 1023 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 MTATP6P31-201ENST00000406985 692 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.78□□□□□ -1.96
SPCS3P61009 AL356968.1-201ENST00000416622 474 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.78□□□□□ -1.96
SPCS3P61009 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.78□□□□□ -1.96
SPCS3P61009 AC016712.1-201ENST00000431088 378 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.78□□□□□ -1.96
SPCS3P61009 HMGB1P48-201ENST00000446155 598 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 HMGB1P5-202ENST00000451497 985 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 AC097262.1-201ENST00000452559 548 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 AL445669.2-201ENST00000454425 421 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 AC104689.1-201ENST00000473356 768 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.78□□□□□ -1.96
SPCS3P61009 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.78□□□□□ -1.96
SPCS3P61009 AC026402.1-201ENST00000513642 170 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 AC016550.3-201ENST00000515706 767 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.78□□□□□ -1.96
SPCS3P61009 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.78□□□□□ -1.96
SPCS3P61009 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SPCS3P61009 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.78□□□□□ -1.96
SPCS3P61009 AC006111.3-201ENST00000622137 383 ntBASIC2.78□□□□□ -1.96
SPCS3P61009 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms