Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.1□□□□□ -1.75
LDLRP01130 AC105227.2-201ENST00000615075 605 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AC004825.2-201ENST00000616634 455 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AP002782.1-201ENST00000623107 614 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AC112200.1-201ENST00000625015 234 ntBASIC4.1□□□□□ -1.75
LDLRP01130 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LDLRP01130 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LDLRP01130 MTND4P4-201ENST00000439033 1366 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LDLRP01130 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LDLRP01130 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LDLRP01130 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LDLRP01130 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
LDLRP01130 AC021146.4-201ENST00000309229 279 ntBASIC4.09□□□□□ -1.75
LDLRP01130 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LDLRP01130 RNU6-582P-201ENST00000362989 107 ntBASIC4.09□□□□□ -1.75
LDLRP01130 RNU6-839P-201ENST00000363347 108 ntBASIC4.09□□□□□ -1.75
LDLRP01130 Y_RNA.169-201ENST00000363745 96 ntBASIC4.09□□□□□ -1.75
LDLRP01130 RNU6-761P-201ENST00000384148 107 ntBASIC4.09□□□□□ -1.75
LDLRP01130 Y_RNA.505-201ENST00000384489 102 ntBASIC4.09□□□□□ -1.75
LDLRP01130 MIR217-201ENST00000384817 110 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 AL133264.1-201ENST00000407157 562 ntBASIC4.09□□□□□ -1.75
LDLRP01130 RN7SKP177-201ENST00000410567 355 ntBASIC4.09□□□□□ -1.75
LDLRP01130 TMSB10P2-201ENST00000416049 131 ntBASIC4.09□□□□□ -1.75
LDLRP01130 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 AC090960.1-201ENST00000421072 306 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.09□□□□□ -1.75
LDLRP01130 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.09□□□□□ -1.75
LDLRP01130 Z93242.1-201ENST00000427102 353 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AL589823.1-201ENST00000429577 183 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 MTCO1P54-201ENST00000430139 712 ntBASIC4.09□□□□□ -1.75
LDLRP01130 HIGD1AP4-201ENST00000430194 280 ntBASIC4.09□□□□□ -1.75
LDLRP01130 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AC010881.1-201ENST00000433830 235 ntBASIC4.09□□□□□ -1.75
LDLRP01130 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.09□□□□□ -1.75
LDLRP01130 RPS3AP54-201ENST00000435535 734 ntBASIC4.09□□□□□ -1.75
LDLRP01130 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.09□□□□□ -1.75
LDLRP01130 AC092393.1-201ENST00000439625 742 ntBASIC4.09□□□□□ -1.75
LDLRP01130 FGF7P5-201ENST00000441829 291 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.09□□□□□ -1.75
LDLRP01130 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LDLRP01130 NECAP1P2-201ENST00000455668 727 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 RPS15AP1-201ENST00000457423 391 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.09□□□□□ -1.75
LDLRP01130 AC011979.1-201ENST00000472300 483 ntBASIC4.09□□□□□ -1.75
LDLRP01130 RN7SL132P-201ENST00000478131 296 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AC006517.1-201ENST00000480485 328 ntBASIC4.09□□□□□ -1.75
LDLRP01130 VPS26AP1-201ENST00000483197 979 ntBASIC4.09□□□□□ -1.75
LDLRP01130 OR2A20P-203ENST00000498397 1268 ntBASIC4.09□□□□□ -1.75
LDLRP01130 VWA8P1-201ENST00000510889 176 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AC022790.1-201ENST00000522872 204 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.09□□□□□ -1.75
LDLRP01130 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.09□□□□□ -1.75
LDLRP01130 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.09□□□□□ -1.75
LDLRP01130 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 AC109446.2-201ENST00000567872 497 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AC017100.2-201ENST00000584628 355 ntBASIC4.09□□□□□ -1.75
LDLRP01130 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.09□□□□□ -1.75
LDLRP01130 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.09□□□□□ -1.75
LDLRP01130 Z99497.2-201ENST00000603634 310 ntBASIC4.09□□□□□ -1.75
LDLRP01130 AC024220.1-201ENST00000603675 484 ntBASIC4.09□□□□□ -1.75
LDLRP01130 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
LDLRP01130 MAPK10-253ENST00000641010 4072 ntBASIC4.09□□□□□ -1.75
LDLRP01130 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LDLRP01130 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LDLRP01130 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
LDLRP01130 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LDLRP01130 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDLRP01130 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDLRP01130 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.08□□□□□ -1.76
LDLRP01130 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDLRP01130 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LDLRP01130 MIR208A-201ENST00000362287 71 ntBASIC4.08□□□□□ -1.76
LDLRP01130 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDLRP01130 MIR659-201ENST00000384963 97 ntBASIC4.08□□□□□ -1.76
LDLRP01130 SNORD66.1-201ENST00000391230 76 ntBASIC4.08□□□□□ -1.76
LDLRP01130 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDLRP01130 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDLRP01130 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDLRP01130 TMSB4XP8-201ENST00000402089 135 ntBASIC4.08□□□□□ -1.76
LDLRP01130 TMSB4XP6-201ENST00000415187 135 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC007435.1-201ENST00000421086 415 ntBASIC4.08□□□□□ -1.76
LDLRP01130 TMSB4XP1-201ENST00000424567 135 ntBASIC4.08□□□□□ -1.76
LDLRP01130 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LDLRP01130 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LDLRP01130 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.08□□□□□ -1.76
LDLRP01130 AC010153.1-201ENST00000432862 727 ntBASIC4.08□□□□□ -1.76
LDLRP01130 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.08□□□□□ -1.76
LDLRP01130 UBE2V1P3-201ENST00000439651 417 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms