Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
MSH4O15457 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MSH4O15457 AC119744.1-201ENST00000454746 1715 ntBASIC3.73□□□□□ -1.81
MSH4O15457 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MSH4O15457 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
MSH4O15457 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MSH4O15457 ENSAP3-201ENST00000312710 333 ntBASIC3.73□□□□□ -1.81
MSH4O15457 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MSH4O15457 RNU4-27P-201ENST00000410889 139 ntBASIC3.73□□□□□ -1.81
MSH4O15457 USP9YP19-201ENST00000412165 485 ntBASIC3.73□□□□□ -1.81
MSH4O15457 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.73□□□□□ -1.81
MSH4O15457 AC093698.1-201ENST00000423843 571 ntBASIC3.73□□□□□ -1.81
MSH4O15457 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.73□□□□□ -1.81
MSH4O15457 FTH1P6-201ENST00000430768 320 ntBASIC3.73□□□□□ -1.81
MSH4O15457 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.73□□□□□ -1.81
MSH4O15457 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.73□□□□□ -1.81
MSH4O15457 AL591503.2-201ENST00000442314 1005 ntBASIC3.73□□□□□ -1.81
MSH4O15457 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.73□□□□□ -1.81
MSH4O15457 BX510359.1-201ENST00000456973 237 ntBASIC3.73□□□□□ -1.81
MSH4O15457 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MSH4O15457 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.73□□□□□ -1.81
MSH4O15457 AC008494.2-201ENST00000514544 370 ntBASIC3.73□□□□□ -1.81
MSH4O15457 RN7SKP82-201ENST00000516786 223 ntBASIC3.73□□□□□ -1.81
MSH4O15457 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.73□□□□□ -1.81
MSH4O15457 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.73□□□□□ -1.81
MSH4O15457 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.73□□□□□ -1.81
MSH4O15457 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
MSH4O15457 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.73□□□□□ -1.81
MSH4O15457 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.73□□□□□ -1.81
MSH4O15457 AC104229.1-201ENST00000561364 255 ntBASIC3.73□□□□□ -1.81
MSH4O15457 AC015917.1-201ENST00000579654 510 ntBASIC3.73□□□□□ -1.81
MSH4O15457 CKS1BP3-201ENST00000600888 237 ntBASIC3.73□□□□□ -1.81
MSH4O15457 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.73□□□□□ -1.81
MSH4O15457 OR6R2P-201ENST00000609216 300 ntBASIC3.73□□□□□ -1.81
MSH4O15457 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.73□□□□□ -1.81
MSH4O15457 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MSH4O15457 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.73□□□□□ -1.81
MSH4O15457 AC104446.1-201ENST00000613728 1321 ntBASIC3.72□□□□□ -1.81
MSH4O15457 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
MSH4O15457 AC058791.1-201ENST00000608412 3198 ntBASIC3.72□□□□□ -1.81
MSH4O15457 AC025125.1-201ENST00000624743 1922 ntBASIC3.72□□□□□ -1.81
MSH4O15457 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MSH4O15457 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
MSH4O15457 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
MSH4O15457 AC092745.2-202ENST00000411880 369 ntBASIC3.72□□□□□ -1.81
MSH4O15457 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MSH4O15457 AC093422.3-201ENST00000428506 305 ntBASIC3.72□□□□□ -1.81
MSH4O15457 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.72□□□□□ -1.81
MSH4O15457 RPL17P35-201ENST00000432217 549 ntBASIC3.72□□□□□ -1.81
MSH4O15457 AL512661.1-201ENST00000434586 1253 ntBASIC3.72□□□□□ -1.81
MSH4O15457 AC009263.1-201ENST00000441193 1239 ntBASIC3.72□□□□□ -1.81
MSH4O15457 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.72□□□□□ -1.81
MSH4O15457 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.72□□□□□ -1.81
MSH4O15457 AL035407.2-201ENST00000454090 378 ntBASIC3.72□□□□□ -1.81
MSH4O15457 RPL7P47-201ENST00000497299 556 ntBASIC3.72□□□□□ -1.81
MSH4O15457 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.72□□□□□ -1.81
MSH4O15457 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.72□□□□□ -1.81
MSH4O15457 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.72□□□□□ -1.81
MSH4O15457 AC091515.1-201ENST00000548110 679 ntBASIC3.72□□□□□ -1.81
MSH4O15457 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.72□□□□□ -1.81
MSH4O15457 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.72□□□□□ -1.81
MSH4O15457 AC009101.1-201ENST00000568135 242 ntBASIC3.72□□□□□ -1.81
MSH4O15457 AC106734.1-201ENST00000568646 663 ntBASIC3.72□□□□□ -1.81
MSH4O15457 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.72□□□□□ -1.81
MSH4O15457 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.72□□□□□ -1.81
MSH4O15457 AL392112.1-201ENST00000605115 829 ntBASIC3.72□□□□□ -1.81
MSH4O15457 FRG1HP-204ENST00000617940 757 ntBASIC3.72□□□□□ -1.81
MSH4O15457 AC073569.3-201ENST00000619055 682 ntBASIC3.72□□□□□ -1.81
MSH4O15457 AL136964.1-201ENST00000622038 2990 ntBASIC3.72□□□□□ -1.81
MSH4O15457 AC097460.3-201ENST00000623099 442 ntBASIC3.72□□□□□ -1.81
MSH4O15457 AL590396.2-201ENST00000636511 1041 ntBASIC3.72□□□□□ -1.81
MSH4O15457 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
MSH4O15457 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
MSH4O15457 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
MSH4O15457 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
MSH4O15457 SEC63P2-201ENST00000503863 1939 ntBASIC3.72□□□□□ -1.81
MSH4O15457 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
MSH4O15457 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
MSH4O15457 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.71□□□□□ -1.81
MSH4O15457 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.71□□□□□ -1.82
MSH4O15457 USP8P1-201ENST00000494673 3183 ntBASIC3.71□□□□□ -1.82
MSH4O15457 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.71□□□□□ -1.82
MSH4O15457 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.71□□□□□ -1.82
MSH4O15457 MIR16-2-201ENST00000362117 81 ntBASIC3.71□□□□□ -1.82
MSH4O15457 AL357075.1-201ENST00000404107 726 ntBASIC3.71□□□□□ -1.82
MSH4O15457 MIR1183-201ENST00000408856 89 ntBASIC3.71□□□□□ -1.82
MSH4O15457 AC004987.3-201ENST00000413879 771 ntBASIC3.71□□□□□ -1.82
MSH4O15457 AL158050.1-201ENST00000416077 457 ntBASIC3.71□□□□□ -1.82
MSH4O15457 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.71□□□□□ -1.82
MSH4O15457 AC127526.1-201ENST00000417526 366 ntBASIC3.71□□□□□ -1.82
MSH4O15457 AC073310.1-201ENST00000423226 1033 ntBASIC3.71□□□□□ -1.82
MSH4O15457 AL365396.1-201ENST00000430854 671 ntBASIC3.71□□□□□ -1.82
MSH4O15457 AC091862.1-201ENST00000438016 1100 ntBASIC3.71□□□□□ -1.82
MSH4O15457 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.71□□□□□ -1.82
MSH4O15457 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.71□□□□□ -1.82
MSH4O15457 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.71□□□□□ -1.82
MSH4O15457 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.71□□□□□ -1.82
MSH4O15457 RPL32P34-201ENST00000486380 400 ntBASIC3.71□□□□□ -1.82
MSH4O15457 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.71□□□□□ -1.82
MSH4O15457 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms