Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RGPD3A6NKT7 SPATA2P1-201ENST00000431223 2055 ntBASIC3.7□□□□□ -1.82
RGPD3A6NKT7 SETP10-201ENST00000424368 814 ntBASIC3.7□□□□□ -1.82
RGPD3A6NKT7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.7□□□□□ -1.82
RGPD3A6NKT7 IFNA11P-201ENST00000446352 526 ntBASIC3.7□□□□□ -1.82
RGPD3A6NKT7 MTCO3P20-201ENST00000454926 688 ntBASIC3.7□□□□□ -1.82
RGPD3A6NKT7 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.7□□□□□ -1.82
RGPD3A6NKT7 AC112184.1-201ENST00000505179 312 ntBASIC3.7□□□□□ -1.82
RGPD3A6NKT7 AC008507.1-201ENST00000587506 734 ntBASIC3.7□□□□□ -1.82
RGPD3A6NKT7 MIR6817-201ENST00000615588 66 ntBASIC3.7□□□□□ -1.82
RGPD3A6NKT7 AC022509.4-201ENST00000621404 572 ntBASIC3.7□□□□□ -1.82
RGPD3A6NKT7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RGPD3A6NKT7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RGPD3A6NKT7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.69□□□□□ -1.82
RGPD3A6NKT7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.69□□□□□ -1.82
RGPD3A6NKT7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.69□□□□□ -1.82
RGPD3A6NKT7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RGPD3A6NKT7 ATP5F1P6-201ENST00000402768 767 ntBASIC3.69□□□□□ -1.82
RGPD3A6NKT7 AL513477.1-202ENST00000417061 214 ntBASIC3.69□□□□□ -1.82
RGPD3A6NKT7 ISCA1P2-201ENST00000438679 421 ntBASIC3.69□□□□□ -1.82
RGPD3A6NKT7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RGPD3A6NKT7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.69□□□□□ -1.82
RGPD3A6NKT7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.69□□□□□ -1.82
RGPD3A6NKT7 AC009977.1-201ENST00000586015 570 ntBASIC3.69□□□□□ -1.82
RGPD3A6NKT7 AC006840.1-201ENST00000623069 542 ntBASIC3.69□□□□□ -1.82
RGPD3A6NKT7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
RGPD3A6NKT7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RGPD3A6NKT7 AC134882.1-201ENST00000603738 1676 ntBASIC3.69□□□□□ -1.82
RGPD3A6NKT7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 RPS12P5-201ENST00000423449 371 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 AL365396.1-201ENST00000430854 671 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 RPL12P26-201ENST00000452430 487 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 AL590639.1-201ENST00000456484 337 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 AC015911.5-201ENST00000587076 451 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 RMST_8.1-201ENST00000610287 165 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 RNA5SP68-201ENST00000363885 119 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 RNU1-112P-201ENST00000364401 164 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 AL138878.1-201ENST00000405131 347 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 RNA5SP247-201ENST00000411181 105 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 DUTP6-201ENST00000425573 462 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 RNU6-84P-201ENST00000607737 102 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 AL592494.2-201ENST00000425455 1548 ntBASIC3.68□□□□□ -1.82
RGPD3A6NKT7 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.68□□□□□ -1.82
RGPD3A6NKT7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.67□□□□□ -1.82
RGPD3A6NKT7 OR52B1P-201ENST00000316506 909 ntBASIC3.67□□□□□ -1.82
RGPD3A6NKT7 AC127526.1-201ENST00000417526 366 ntBASIC3.67□□□□□ -1.82
RGPD3A6NKT7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.67□□□□□ -1.82
RGPD3A6NKT7 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.67□□□□□ -1.82
RGPD3A6NKT7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
RGPD3A6NKT7 AP003122.3-201ENST00000526316 255 ntBASIC3.67□□□□□ -1.82
RGPD3A6NKT7 AC027176.1-201ENST00000560204 514 ntBASIC3.67□□□□□ -1.82
RGPD3A6NKT7 SNORD53-201ENST00000579969 78 ntBASIC3.67□□□□□ -1.82
RGPD3A6NKT7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.67□□□□□ -1.82
RGPD3A6NKT7 AL137072.1-201ENST00000603444 466 ntBASIC3.67□□□□□ -1.82
RGPD3A6NKT7 AC131238.1-201ENST00000617135 328 ntBASIC3.67□□□□□ -1.82
RGPD3A6NKT7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.67□□□□□ -1.82
RGPD3A6NKT7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RGPD3A6NKT7 AC087190.4-201ENST00000574616 8334 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 RPL23AP23-201ENST00000452590 471 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 RPS29P21-201ENST00000496272 170 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AP001646.1-201ENST00000527936 915 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AC007566.2-201ENST00000603642 413 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AL008729.2-201ENST00000606393 473 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AC008725.1-201ENST00000605123 2263 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 RPL23AP48-201ENST00000406913 488 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 RANP4-201ENST00000413361 655 ntBASIC3.66□□□□□ -1.82
RGPD3A6NKT7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.66□□□□□ -1.82
RGPD3A6NKT7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms