Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU2-50P-201ENST00000410494 143 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 PMCHL1-202ENST00000423102 261 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AL663074.2-201ENST00000440621 479 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 RPS27AP3-201ENST00000453803 454 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AL035090.1-201ENST00000454835 332 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 RN7SL352P-201ENST00000466002 277 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AC004062.1-201ENST00000509926 645 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 Y_RNA.682-201ENST00000516457 100 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AC139365.2-201ENST00000517972 253 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AC063950.1-201ENST00000552036 308 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 RPL10P14-201ENST00000565265 298 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 MIR3934-201ENST00000579806 107 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AC245389.1-201ENST00000605141 529 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AL442067.1-201ENST00000613261 223 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AC125336.1-201ENST00000508893 2827 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AP001350.1-201ENST00000601906 1524 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 AC009313.2-201ENST00000417893 1941 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 MTND5P33-201ENST00000571250 1450 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 AL355834.1-201ENST00000556602 3965 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 AL161781.1-201ENST00000354277 403 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 Y_RNA.395-201ENST00000383945 109 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 SNORA67-201ENST00000384423 137 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 ARF4P3-201ENST00000397387 509 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 MIR548F5-201ENST00000408421 86 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 RNU6-370P-201ENST00000411008 104 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 OR4K11P-201ENST00000431829 904 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 RPL23AP74-201ENST00000437246 471 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 HSPE1P28-201ENST00000443139 211 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 AC002553.2-201ENST00000453217 340 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 RPS3AP41-201ENST00000462701 778 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 AC126615.2-201ENST00000553003 515 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 OR4K8P-201ENST00000578842 1048 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 AL118522.2-201ENST00000616045 615 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 MIR7641-1-201ENST00000627518 61 ntBASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
ZC3H4Q9UPT8 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 RNVU1-6-201ENST00000364688 164 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 RNU4-48P-201ENST00000365559 182 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 RNU6-1013P-201ENST00000384180 107 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 MIR192-201ENST00000384915 110 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 MIR514A2-201ENST00000385131 88 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 MIR514A3-201ENST00000385132 88 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC016769.3-201ENST00000396562 315 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms