Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 C4BPAP1-201ENST00000415474 1893 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 CASC19-221ENST00000641309 1382 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 RPL23P2-201ENST00000320371 421 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 RNU6-289P-201ENST00000364093 107 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 RNU2-8P-201ENST00000410727 190 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 RAD23BP1-201ENST00000421404 1227 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 DDX39BP1-205ENST00000422507 192 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AL445669.1-201ENST00000426743 755 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC096632.1-201ENST00000427395 310 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AL451074.3-201ENST00000437709 472 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC013356.1-201ENST00000489027 564 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC018797.3-201ENST00000513388 1241 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AP006245.2-201ENST00000522004 300 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AP003034.1-201ENST00000534621 422 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AL133457.1-201ENST00000564251 987 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC090312.1-201ENST00000580637 348 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 MAGOH2P-202ENST00000584384 429 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AL365503.1-201ENST00000605247 905 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC068722.2-201ENST00000618734 544 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AL445264.1-201ENST00000621719 171 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC022140.2-201ENST00000623500 188 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AP003122.6-201ENST00000623831 495 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AP005264.7-201ENST00000625003 745 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC110994.2-201ENST00000635481 492 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 HSPA8P18-201ENST00000439846 1928 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC093591.2-201ENST00000565254 3843 ntBASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PPARGC1AQ9UBK2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC093535.2-201ENST00000624769 2326 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC025574.1-201ENST00000554784 1653 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 GNG5P1-201ENST00000255500 204 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 RN7SKP113-201ENST00000363891 295 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 RNY4P34-201ENST00000364779 95 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 SNORA51.6-201ENST00000384151 125 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 MIR765-201ENST00000390226 114 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 RPS3AP36-201ENST00000398190 775 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC073464.1-201ENST00000429823 534 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 RPL22P17-201ENST00000438729 315 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC090142.1-201ENST00000465776 462 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC087312.1-201ENST00000471411 480 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 RPS18P6-201ENST00000476880 458 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 BX284632.1-201ENST00000478218 541 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC008953.1-201ENST00000497334 318 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC008638.1-201ENST00000506035 866 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 OR5M14P-201ENST00000506803 618 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC006390.1-201ENST00000508068 283 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC098799.2-201ENST00000509466 868 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 RNU6-358P-201ENST00000516564 75 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 RNU2-46P-201ENST00000517038 113 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 RNU6-201P-201ENST00000517100 61 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 FAM92A1P1-201ENST00000528023 890 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms