Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AL139109.1-201ENST00000455491 297 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 AC090453.1-201ENST00000495560 436 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 AC009901.1-201ENST00000506703 541 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 TXNP6-201ENST00000510190 310 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 KHDC1P1-201ENST00000511053 508 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 RNA5SP116-201ENST00000516132 98 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 Y_RNA.683-201ENST00000516508 93 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 RN7SKP96-201ENST00000516948 297 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 HMGN2P6-201ENST00000551091 273 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 AL049839.1-201ENST00000556151 657 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 OR4H6P-201ENST00000563771 921 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 AC024614.2-201ENST00000577584 372 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 AC115085.1-201ENST00000588924 229 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 AL136984.1-201ENST00000607611 1893 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 PABPC1P8-201ENST00000452851 2086 ntBASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNTNAP3Q9BZ76 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 TPTE2P4-201ENST00000258589 1605 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 RNU6-190P-201ENST00000384154 102 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 RNU2-51P-201ENST00000410708 197 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AC130360.1-201ENST00000425489 1117 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AC236972.1-201ENST00000433225 199 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 HMGB1P4-201ENST00000455362 567 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 RNU7-182P-201ENST00000459009 62 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AC022215.1-201ENST00000481770 362 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AC130365.2-201ENST00000525882 1201 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AC025884.1-201ENST00000556034 378 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 RN7SL708P-201ENST00000580952 299 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 AC068870.2-201ENST00000620635 389 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 HSPA8P18-201ENST00000439846 1928 ntBASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNTNAP3Q9BZ76 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 PABPC1P6-201ENST00000445594 1829 ntBASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 AC008957.3-201ENST00000624112 2242 ntBASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 HSPE1P11-201ENST00000339579 310 ntBASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 RNY1P5-201ENST00000383890 115 ntBASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 MIR137-201ENST00000385223 102 ntBASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.06□□□□□ -1.44
CNTNAP3Q9BZ76 MRPS18CP6-201ENST00000423587 223 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms