Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 MIR1283-1-201ENST00000408494 87 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 KF459542.1-201ENST00000450908 553 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 AC013480.1-201ENST00000451514 346 ntTSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 AC108448.1-201ENST00000455154 293 ntTSL 3 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 snoU13.11-201ENST00000459219 104 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 RN7SL683P-201ENST00000460552 270 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 SNORA31.20-201ENST00000517111 133 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 AC100823.2-201ENST00000518337 699 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 AC022695.1-201ENST00000522089 237 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 IL32-225ENST00000548246 447 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 MIR4753-201ENST00000585119 83 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF548-207ENST00000597400 589 ntTSL 3 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 SEPT14P17-201ENST00000617978 177 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 KRTAP10-12-202ENST00000618832 282 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 AL121955.1-201ENST00000620852 303 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ILK-216ENST00000627400 111 ntTSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 MKNK1-AS1-201ENST00000602433 2445 ntTSL 2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 FBXO3-201ENST00000265651 2397 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 UVSSA-201ENST00000324803 4441 ntBASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 TULP3-201ENST00000397132 1951 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 EIF3D-203ENST00000405442 1851 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ACOT11-202ENST00000371316 6369 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 USP54-201ENST00000339859 6247 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 CACNA1E-203ENST00000360108 6970 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
KRTAP3-3Q9BYR6 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 STAT6-201ENST00000300134 4034 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 GRB10-203ENST00000398810 4785 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 PCSK2-201ENST00000262545 4740 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 BBS9-202ENST00000350941 3899 ntTSL 5 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 ALDH7A1P1-201ENST00000510973 1533 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 CELF1-205ENST00000395292 2191 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 KIAA0087-201ENST00000242109 4283 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 DMD-212ENST00000378723 4645 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 VTRNA1-2-201ENST00000365241 89 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 APOM-203ENST00000375920 709 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 RNVU1-7-201ENST00000383858 164 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 IGLV5-45-201ENST00000390296 397 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 Y_RNA.596-201ENST00000410462 109 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 RNU6-57P-201ENST00000411348 103 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 AC108868.1-201ENST00000431411 554 ntTSL 4 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 RPS29P14-201ENST00000431518 171 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 AC092042.3-203ENST00000443313 950 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 RN7SKP241-201ENST00000464584 291 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 RN7SL310P-201ENST00000465317 281 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 RN7SL559P-201ENST00000476501 297 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 RN7SL320P-201ENST00000484133 295 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 AC023818.1-201ENST00000498379 384 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 RACK1-211ENST00000504726 388 ntTSL 5 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 UQCRBP3-201ENST00000509483 312 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 RNA5SP411-201ENST00000516136 114 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 SCARNA5-201ENST00000516201 276 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 RNA5SP40-201ENST00000517147 110 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 TDGF1P5-201ENST00000523009 453 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 AC105219.3-201ENST00000527579 374 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 ARHGAP23P1-202ENST00000567025 423 ntTSL 5 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 C17orf62-220ENST00000580560 564 ntTSL 4 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 AC015688.1-201ENST00000584894 199 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 AL138966.1-201ENST00000603212 313 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms