Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RNA5SP498-201ENST00000411342 120 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 AL133482.1-201ENST00000415988 498 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 AL031663.1-201ENST00000437445 219 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 RPL23AP89-201ENST00000439324 255 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 NEFMP1-201ENST00000443423 1006 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 NUTF2P7-201ENST00000453086 375 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 SNRPFP3-201ENST00000457792 225 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 AC090686.1-201ENST00000481577 749 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 AC011005.3-201ENST00000491624 395 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 SCARNA6.1-201ENST00000516989 238 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 HSPE1P3-201ENST00000559254 309 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 AC034105.4-201ENST00000568304 277 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 MIR4703-201ENST00000577728 79 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 MIR3146-201ENST00000580367 79 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 MIR5583-1-201ENST00000580941 59 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 OR6R2P-201ENST00000609216 300 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 KPNA2P2-201ENST00000419546 1489 ntBASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL25A1Q9BXS0 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AC011978.2-201ENST00000569835 2054 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AC025125.1-201ENST00000624743 1922 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 RNU6-704P-201ENST00000364162 103 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AL359837.1-201ENST00000381357 287 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 RNU6-1029P-201ENST00000384109 107 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 RNA5SP105-201ENST00000391123 113 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 U3.36-201ENST00000408418 213 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 MIR548H3-201ENST00000408771 118 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 E2F6P2-201ENST00000420708 748 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AC004975.1-201ENST00000428733 208 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 MTATP6P16-201ENST00000434543 526 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 CYCSP24-201ENST00000445119 316 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AC243772.1-201ENST00000451620 410 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 FRG2FP-204ENST00000453982 852 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AL139109.1-201ENST00000455491 297 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AC104563.1-201ENST00000476147 376 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AC106800.3-201ENST00000511389 308 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AL354718.1-201ENST00000619764 589 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AL442639.1-201ENST00000625030 1899 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AC007842.1-201ENST00000597336 2039 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 DDX18P4-201ENST00000511690 1966 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AL391262.1-201ENST00000556558 1992 ntBASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.06□□□□□ -1.44
COL25A1Q9BXS0 AL137058.3-201ENST00000624531 3099 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms