Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC009948.4-201ENST00000604692 675 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AL672296.1-201ENST00000427780 2158 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 MIR148B-201ENST00000362252 99 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC126389.1-201ENST00000477436 290 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC004024.1-201ENST00000549244 247 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC015917.1-201ENST00000579654 510 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC103881.1-201ENST00000603476 538 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC092628.2-201ENST00000622492 339 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 MIR6715B-201ENST00000637172 77 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 CR383658.2-201ENST00000547576 1525 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 SNORD67-201ENST00000390833 111 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 RPS12P18-201ENST00000442381 270 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 RPS20P22-201ENST00000473700 357 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 S100A11P1-201ENST00000477525 312 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC018797.3-201ENST00000513388 1241 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AL121766.1-201ENST00000547436 487 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC016727.1-205ENST00000605437 569 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 FTX-214ENST00000638437 12267 ntTSL 5 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC013268.2-201ENST00000420753 337 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 MTCO1P51-201ENST00000427672 1060 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC135999.1-201ENST00000478962 479 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC068724.1-201ENST00000487100 792 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC006445.1-201ENST00000491925 405 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 NPM1P24-201ENST00000428039 894 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 IFNA11P-201ENST00000446352 526 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC016696.1-201ENST00000446949 318 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 UBE2V2P4-201ENST00000447495 259 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 NPM1P39-201ENST00000449818 867 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC017076.1-201ENST00000607613 578 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 uc_338.32-201ENST00000615087 172 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 FAM35BP-202ENST00000497389 3337 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 MAPK6PS3-201ENST00000403865 2162 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 SNORA5B-201ENST00000363786 132 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC005002.1-201ENST00000447458 540 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AP001025.2-201ENST00000490908 477 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 RNU6-984P-201ENST00000363236 109 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 Z93242.1-201ENST00000427102 353 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC006989.1-201ENST00000427212 131 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 Z73965.1-201ENST00000623412 2297 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 EXOC5P1-201ENST00000510543 1969 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 SNORA70B-201ENST00000384210 135 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 RN7SKP111-201ENST00000410349 271 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AL035407.1-201ENST00000429211 571 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AL035458.1-201ENST00000433096 585 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC008413.1-201ENST00000511864 177 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC007424.1-203ENST00000554613 687 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AL512643.1-201ENST00000635735 524 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC009487.2-201ENST00000420969 6821 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 RNU6-178P-201ENST00000384631 104 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 MIR489-201ENST00000384923 84 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 HMGB3P18-201ENST00000406327 590 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC0.95□□□□□ -2.26
SYNE1Q8NF91 BTF3L4P4-201ENST00000506381 449 ntBASIC0.95□□□□□ -2.26
SYNE1Q8NF91 APOOP4-201ENST00000513530 597 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms