Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 RNA5SP156-201ENST00000410250 110 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 RNU6-1050P-201ENST00000410388 107 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 RPS17P17-201ENST00000419392 409 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 AC092013.1-201ENST00000438795 332 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 RPL21P2-201ENST00000440049 481 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 SIAH1P1-201ENST00000479411 923 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 RNU6-1023P-201ENST00000516137 106 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 RNA5SP434-201ENST00000516647 121 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 OR4P1P-201ENST00000530808 1136 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 CYCSP28-201ENST00000534284 321 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 OR11H5P-201ENST00000554039 926 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 AC020916.2-201ENST00000591242 360 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 AL512652.1-201ENST00000619006 500 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 AC022400.9-201ENST00000623633 273 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 OR55B1P-203ENST00000641518 2602 ntBASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.16□□□□□ -1.42
LYSMD3Q7Z3D4 AC011460.1-201ENST00000636268 1834 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC104966.1-201ENST00000467010 1464 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC015799.1-201ENST00000622996 3122 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 SNORA21-201ENST00000362423 132 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 RNA5SP375-201ENST00000362975 119 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 RN7SKP269-201ENST00000365545 319 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 MIR450B-201ENST00000401182 78 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC139712.2-201ENST00000424302 339 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 RPL21P91-201ENST00000429231 479 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 RPS15AP10-201ENST00000432472 382 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC023141.3-201ENST00000436698 278 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC079922.1-201ENST00000443291 359 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 RPL23AP43-201ENST00000446445 471 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AL031584.1-201ENST00000447169 754 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC002553.3-201ENST00000453002 341 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 PPIAP7-201ENST00000454070 489 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC009963.3-201ENST00000458090 486 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC103987.1-201ENST00000473394 348 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC020893.1-201ENST00000502452 580 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 HIGD1AP13-201ENST00000509878 289 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 FTH1P21-201ENST00000512179 511 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 RNU6-138P-201ENST00000515952 107 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 RNU6-475P-201ENST00000516073 104 ntBASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.15□□□□□ -1.42
LYSMD3Q7Z3D4 AP000620.1-201ENST00000527147 504 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms