Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.11□□□□□ -1.75
LTBQ06643 OR7K1P-201ENST00000546439 926 ntBASIC4.11□□□□□ -1.75
LTBQ06643 OR6C7P-201ENST00000547875 934 ntBASIC4.11□□□□□ -1.75
LTBQ06643 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.11□□□□□ -1.75
LTBQ06643 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.11□□□□□ -1.75
LTBQ06643 GTF2IP8-201ENST00000560687 584 ntBASIC4.11□□□□□ -1.75
LTBQ06643 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.11□□□□□ -1.75
LTBQ06643 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.11□□□□□ -1.75
LTBQ06643 AC133552.5-201ENST00000604266 540 ntBASIC4.11□□□□□ -1.75
LTBQ06643 AP003973.1-201ENST00000604639 691 ntBASIC4.11□□□□□ -1.75
LTBQ06643 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.11□□□□□ -1.75
LTBQ06643 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.11□□□□□ -1.75
LTBQ06643 AC025594.3-201ENST00000613068 790 ntBASIC4.11□□□□□ -1.75
LTBQ06643 AL353726.1-201ENST00000614041 1000 ntBASIC4.11□□□□□ -1.75
LTBQ06643 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.11□□□□□ -1.75
LTBQ06643 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LTBQ06643 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.11□□□□□ -1.75
LTBQ06643 AC099063.3-201ENST00000642066 185 ntBASIC4.11□□□□□ -1.75
LTBQ06643 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.11□□□□□ -1.75
LTBQ06643 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LTBQ06643 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
LTBQ06643 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
LTBQ06643 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LTBQ06643 AP000756.2-201ENST00000624168 2567 ntBASIC4.1□□□□□ -1.75
LTBQ06643 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.1□□□□□ -1.75
LTBQ06643 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.1□□□□□ -1.75
LTBQ06643 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LTBQ06643 RNU5D-1-201ENST00000363299 116 ntBASIC4.1□□□□□ -1.75
LTBQ06643 SNORA70C-201ENST00000384538 135 ntBASIC4.1□□□□□ -1.75
LTBQ06643 SNORA68.2-201ENST00000391263 128 ntBASIC4.1□□□□□ -1.75
LTBQ06643 AL161909.1-201ENST00000397390 712 ntBASIC4.1□□□□□ -1.75
LTBQ06643 RNA5SP44-201ENST00000410446 133 ntBASIC4.1□□□□□ -1.75
LTBQ06643 CYCSP10-201ENST00000417973 294 ntBASIC4.1□□□□□ -1.75
LTBQ06643 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.1□□□□□ -1.75
LTBQ06643 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.1□□□□□ -1.75
LTBQ06643 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.1□□□□□ -1.75
LTBQ06643 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.1□□□□□ -1.75
LTBQ06643 LARP1BP3-201ENST00000437229 869 ntBASIC4.1□□□□□ -1.75
LTBQ06643 CBX1P1-201ENST00000440184 427 ntBASIC4.1□□□□□ -1.75
LTBQ06643 FHP1-201ENST00000442741 703 ntBASIC4.1□□□□□ -1.75
LTBQ06643 ST13P20-201ENST00000447996 1065 ntBASIC4.1□□□□□ -1.75
LTBQ06643 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.1□□□□□ -1.75
LTBQ06643 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.1□□□□□ -1.75
LTBQ06643 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.1□□□□□ -1.75
LTBQ06643 SNRPGP9-201ENST00000456025 225 ntBASIC4.1□□□□□ -1.75
LTBQ06643 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.1□□□□□ -1.75
LTBQ06643 AC116337.2-201ENST00000477662 156 ntBASIC4.1□□□□□ -1.75
LTBQ06643 RPL9P33-201ENST00000484311 566 ntBASIC4.1□□□□□ -1.75
LTBQ06643 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LTBQ06643 CDC42P4-201ENST00000510507 563 ntBASIC4.1□□□□□ -1.75
LTBQ06643 RFPL4AP5-201ENST00000514977 504 ntBASIC4.1□□□□□ -1.75
LTBQ06643 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.1□□□□□ -1.75
LTBQ06643 OR5G4P-201ENST00000525251 760 ntBASIC4.1□□□□□ -1.75
LTBQ06643 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.1□□□□□ -1.75
LTBQ06643 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
LTBQ06643 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.1□□□□□ -1.75
LTBQ06643 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.1□□□□□ -1.75
LTBQ06643 AC245505.1-201ENST00000556398 224 ntBASIC4.1□□□□□ -1.75
LTBQ06643 BPTFP1-201ENST00000579209 492 ntBASIC4.1□□□□□ -1.75
LTBQ06643 AP005119.2-201ENST00000579735 1105 ntBASIC4.1□□□□□ -1.75
LTBQ06643 RPL7P50-201ENST00000600588 727 ntBASIC4.1□□□□□ -1.75
LTBQ06643 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.1□□□□□ -1.75
LTBQ06643 AC008966.2-201ENST00000606157 453 ntBASIC4.1□□□□□ -1.75
LTBQ06643 AP002360.3-201ENST00000607673 710 ntBASIC4.1□□□□□ -1.75
LTBQ06643 AC008498.1-201ENST00000613012 531 ntBASIC4.1□□□□□ -1.75
LTBQ06643 AC025588.4-201ENST00000615802 908 ntBASIC4.1□□□□□ -1.75
LTBQ06643 AC073534.2-201ENST00000620377 381 ntBASIC4.1□□□□□ -1.75
LTBQ06643 ZNF137P-201ENST00000456718 1920 ntBASIC4.1□□□□□ -1.75
LTBQ06643 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LTBQ06643 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LTBQ06643 BTBD10P1-201ENST00000549824 1352 ntBASIC4.1□□□□□ -1.75
LTBQ06643 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.1□□□□□ -1.75
LTBQ06643 CYP1D1P-201ENST00000416662 1433 ntBASIC4.1□□□□□ -1.75
LTBQ06643 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LTBQ06643 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LTBQ06643 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LTBQ06643 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LTBQ06643 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LTBQ06643 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LTBQ06643 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LTBQ06643 AC012020.1-201ENST00000624541 1728 ntBASIC4.09□□□□□ -1.75
LTBQ06643 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.09□□□□□ -1.75
LTBQ06643 OR14L1P-202ENST00000641545 3009 ntBASIC4.09□□□□□ -1.75
LTBQ06643 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.09□□□□□ -1.75
LTBQ06643 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.09□□□□□ -1.75
LTBQ06643 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 Y_RNA.18-201ENST00000362461 102 ntBASIC4.09□□□□□ -1.75
LTBQ06643 SNORD113.2-201ENST00000364166 89 ntBASIC4.09□□□□□ -1.75
LTBQ06643 RNA5SP387-201ENST00000364226 106 ntBASIC4.09□□□□□ -1.75
LTBQ06643 RNA5SP509-201ENST00000364577 119 ntBASIC4.09□□□□□ -1.75
LTBQ06643 CYCSP45-201ENST00000402289 315 ntBASIC4.09□□□□□ -1.75
LTBQ06643 Z98745.1-201ENST00000402553 494 ntBASIC4.09□□□□□ -1.75
LTBQ06643 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LTBQ06643 AL512430.2-201ENST00000406786 339 ntBASIC4.09□□□□□ -1.75
LTBQ06643 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.09□□□□□ -1.75
LTBQ06643 AC007899.1-201ENST00000412776 775 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms