Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNU2-21P-201ENST00000410368 188 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 AC010385.1-201ENST00000412374 256 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 RPL31P2-201ENST00000413849 377 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.96□□□□□ -1.78
CCNA1P78396 MTND2P21-201ENST00000436242 1042 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.96□□□□□ -1.78
CCNA1P78396 AC097499.1-201ENST00000444277 208 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.96□□□□□ -1.78
CCNA1P78396 AL590399.6-201ENST00000446396 307 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 NPM1P49-201ENST00000448027 714 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 RPL7P47-201ENST00000497299 556 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.96□□□□□ -1.78
CCNA1P78396 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.96□□□□□ -1.78
CCNA1P78396 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.96□□□□□ -1.78
CCNA1P78396 PHBP14-201ENST00000512887 367 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.96□□□□□ -1.78
CCNA1P78396 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 RN7SKP96-201ENST00000516948 297 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 RN7SKP283-201ENST00000517197 270 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.96□□□□□ -1.78
CCNA1P78396 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.96□□□□□ -1.78
CCNA1P78396 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.96□□□□□ -1.78
CCNA1P78396 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.96□□□□□ -1.78
CCNA1P78396 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.96□□□□□ -1.78
CCNA1P78396 CBX3P2-202ENST00000583365 535 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 KLKP1-201ENST00000595979 403 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 AC020914.4-201ENST00000597690 277 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.96□□□□□ -1.78
CCNA1P78396 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.96□□□□□ -1.78
CCNA1P78396 AL079305.1-201ENST00000623159 3008 ntBASIC3.96□□□□□ -1.78
CCNA1P78396 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCNA1P78396 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCNA1P78396 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCNA1P78396 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCNA1P78396 FAM35DP-201ENST00000323387 2712 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCNA1P78396 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCNA1P78396 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCNA1P78396 SNORA7.2-201ENST00000364446 145 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCNA1P78396 BTBD10P2-201ENST00000404779 676 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.95□□□□□ -1.78
CCNA1P78396 RPL7P44-201ENST00000424827 742 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 OSTCP5-201ENST00000425293 453 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.95□□□□□ -1.78
CCNA1P78396 OR51AB1P-201ENST00000429046 620 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 RPS26P40-201ENST00000435209 294 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 AL356535.1-201ENST00000440335 398 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.95□□□□□ -1.78
CCNA1P78396 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.95□□□□□ -1.78
CCNA1P78396 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.95□□□□□ -1.78
CCNA1P78396 CFTRP1-201ENST00000456646 183 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.95□□□□□ -1.78
CCNA1P78396 RPL7P23-201ENST00000493874 747 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.95□□□□□ -1.78
CCNA1P78396 TMEM248P1-201ENST00000510579 951 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.95□□□□□ -1.78
CCNA1P78396 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCNA1P78396 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.95□□□□□ -1.78
CCNA1P78396 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.95□□□□□ -1.78
CCNA1P78396 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.95□□□□□ -1.78
CCNA1P78396 AL360157.1-201ENST00000565962 87 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.95□□□□□ -1.78
CCNA1P78396 MIR5004-201ENST00000579078 107 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.95□□□□□ -1.78
CCNA1P78396 CKS1BP3-201ENST00000600888 237 ntBASIC3.95□□□□□ -1.78
CCNA1P78396 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCNA1P78396 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCNA1P78396 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCNA1P78396 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.94□□□□□ -1.78
CCNA1P78396 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCNA1P78396 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.94□□□□□ -1.78
CCNA1P78396 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCNA1P78396 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCNA1P78396 AMD1P2-201ENST00000412936 992 ntBASIC3.94□□□□□ -1.78
CCNA1P78396 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.94□□□□□ -1.78
CCNA1P78396 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.94□□□□□ -1.78
CCNA1P78396 BOLA3P4-201ENST00000418151 400 ntBASIC3.94□□□□□ -1.78
CCNA1P78396 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.94□□□□□ -1.78
CCNA1P78396 RPS29P31-201ENST00000446147 164 ntBASIC3.94□□□□□ -1.78
CCNA1P78396 HMGB1P16-201ENST00000447155 540 ntBASIC3.94□□□□□ -1.78
CCNA1P78396 MTND2P25-201ENST00000449028 610 ntBASIC3.94□□□□□ -1.78
CCNA1P78396 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.94□□□□□ -1.78
CCNA1P78396 RPL21P13-201ENST00000488305 481 ntBASIC3.94□□□□□ -1.78
CCNA1P78396 RN7SL504P-201ENST00000494496 287 ntBASIC3.94□□□□□ -1.78
CCNA1P78396 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.94□□□□□ -1.78
CCNA1P78396 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.94□□□□□ -1.78
CCNA1P78396 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.94□□□□□ -1.78
CCNA1P78396 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.94□□□□□ -1.78
CCNA1P78396 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCNA1P78396 MTND2P26-201ENST00000528255 1029 ntBASIC3.94□□□□□ -1.78
CCNA1P78396 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCNA1P78396 AP003717.3-201ENST00000544832 1180 ntBASIC3.94□□□□□ -1.78
CCNA1P78396 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.94□□□□□ -1.78
CCNA1P78396 HMGB1P50-201ENST00000605814 607 ntBASIC3.94□□□□□ -1.78
CCNA1P78396 AC090425.2-201ENST00000608818 501 ntBASIC3.94□□□□□ -1.78
CCNA1P78396 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.94□□□□□ -1.78
CCNA1P78396 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.94□□□□□ -1.78
CCNA1P78396 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.94□□□□□ -1.78
CCNA1P78396 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms