Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 Z77249.1-201ENST00000444622 1175 ntBASIC3.56□□□□□ -1.84
CDH6P55285 RPL21P23-201ENST00000446654 460 ntBASIC3.56□□□□□ -1.84
CDH6P55285 AC097262.1-201ENST00000452559 548 ntBASIC3.56□□□□□ -1.84
CDH6P55285 RBMY2UP-201ENST00000453474 324 ntBASIC3.56□□□□□ -1.84
CDH6P55285 RPS4XP2-201ENST00000458402 793 ntBASIC3.56□□□□□ -1.84
CDH6P55285 AC004801.2-202ENST00000463559 283 ntBASIC3.56□□□□□ -1.84
CDH6P55285 RPL23AP67-201ENST00000465341 474 ntBASIC3.56□□□□□ -1.84
CDH6P55285 AC025181.1-201ENST00000477507 416 ntBASIC3.56□□□□□ -1.84
CDH6P55285 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH6P55285 AC005921.1-201ENST00000510589 286 ntBASIC3.56□□□□□ -1.84
CDH6P55285 MIR2276-201ENST00000516886 89 ntBASIC3.56□□□□□ -1.84
CDH6P55285 RNU6-1231P-201ENST00000517185 103 ntBASIC3.56□□□□□ -1.84
CDH6P55285 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH6P55285 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.56□□□□□ -1.84
CDH6P55285 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH6P55285 IGKV2D-19-201ENST00000523346 262 ntBASIC3.56□□□□□ -1.84
CDH6P55285 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH6P55285 AC093014.1-201ENST00000548926 724 ntBASIC3.56□□□□□ -1.84
CDH6P55285 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH6P55285 MIR3186-201ENST00000577404 85 ntBASIC3.56□□□□□ -1.84
CDH6P55285 AC010928.3-201ENST00000587712 541 ntBASIC3.56□□□□□ -1.84
CDH6P55285 AC125494.3-201ENST00000602759 455 ntBASIC3.56□□□□□ -1.84
CDH6P55285 AC135178.6-201ENST00000605314 398 ntBASIC3.56□□□□□ -1.84
CDH6P55285 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH6P55285 AC243312.2-201ENST00000623340 601 ntBASIC3.56□□□□□ -1.84
CDH6P55285 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH6P55285 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH6P55285 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH6P55285 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH6P55285 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CDH6P55285 AC046144.1-201ENST00000478559 1853 ntBASIC3.56□□□□□ -1.84
CDH6P55285 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDH6P55285 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH6P55285 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH6P55285 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH6P55285 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH6P55285 AC104446.1-201ENST00000613728 1321 ntBASIC3.55□□□□□ -1.84
CDH6P55285 SNORA73.2-201ENST00000364946 201 ntBASIC3.55□□□□□ -1.84
CDH6P55285 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CDH6P55285 SNORA51.12-201ENST00000384448 134 ntBASIC3.55□□□□□ -1.84
CDH6P55285 MIR200C-201ENST00000384980 68 ntBASIC3.55□□□□□ -1.84
CDH6P55285 MIR218-2-201ENST00000385006 110 ntBASIC3.55□□□□□ -1.84
CDH6P55285 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH6P55285 EI24P2-201ENST00000397776 1076 ntBASIC3.55□□□□□ -1.84
CDH6P55285 RN7SKP111-201ENST00000410349 271 ntBASIC3.55□□□□□ -1.84
CDH6P55285 UBE2V1P11-201ENST00000411559 285 ntBASIC3.55□□□□□ -1.84
CDH6P55285 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH6P55285 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH6P55285 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH6P55285 RPL23AP82-202ENST00000427528 469 ntBASIC3.55□□□□□ -1.84
CDH6P55285 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH6P55285 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH6P55285 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH6P55285 AL590399.6-201ENST00000446396 307 ntBASIC3.55□□□□□ -1.84
CDH6P55285 AC008264.1-201ENST00000447612 367 ntBASIC3.55□□□□□ -1.84
CDH6P55285 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH6P55285 MRPL35P4-201ENST00000453682 566 ntBASIC3.55□□□□□ -1.84
CDH6P55285 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH6P55285 MTND2P6-201ENST00000455337 1030 ntBASIC3.55□□□□□ -1.84
CDH6P55285 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.55□□□□□ -1.84
CDH6P55285 CENPBD1P1-201ENST00000464061 469 ntBASIC3.55□□□□□ -1.84
CDH6P55285 AC091564.1-201ENST00000464563 479 ntBASIC3.55□□□□□ -1.84
CDH6P55285 AC073522.1-201ENST00000483312 377 ntBASIC3.55□□□□□ -1.84
CDH6P55285 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH6P55285 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH6P55285 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH6P55285 AC103833.1-201ENST00000517442 172 ntBASIC3.55□□□□□ -1.84
CDH6P55285 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH6P55285 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH6P55285 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH6P55285 AL389895.1-201ENST00000554127 252 ntBASIC3.55□□□□□ -1.84
CDH6P55285 AC027104.1-201ENST00000563702 681 ntBASIC3.55□□□□□ -1.84
CDH6P55285 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH6P55285 AL365503.1-201ENST00000605247 905 ntBASIC3.55□□□□□ -1.84
CDH6P55285 SNORA51-201ENST00000606420 132 ntBASIC3.55□□□□□ -1.84
CDH6P55285 RMST_8.1-201ENST00000610287 165 ntBASIC3.55□□□□□ -1.84
CDH6P55285 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH6P55285 AC024595.1-201ENST00000623088 387 ntBASIC3.55□□□□□ -1.84
CDH6P55285 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CDH6P55285 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH6P55285 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CDH6P55285 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH6P55285 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH6P55285 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH6P55285 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CDH6P55285 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH6P55285 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH6P55285 AL157700.1-201ENST00000561973 1432 ntBASIC3.54□□□□□ -1.84
CDH6P55285 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH6P55285 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CDH6P55285 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CDH6P55285 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH6P55285 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH6P55285 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH6P55285 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH6P55285 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH6P55285 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CDH6P55285 SNORA31-201ENST00000362607 130 ntBASIC3.54□□□□□ -1.84
CDH6P55285 RNA5SP189-201ENST00000364920 115 ntBASIC3.54□□□□□ -1.84
CDH6P55285 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms