Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.26□□□□□ -1.25
NUBP1P53384 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NUBP1P53384 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC7.26□□□□□ -1.25
NUBP1P53384 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
NUBP1P53384 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.26□□□□□ -1.25
NUBP1P53384 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NUBP1P53384 AC241584.2-201ENST00000637142 2090 ntBASIC7.26□□□□□ -1.25
NUBP1P53384 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC7.26□□□□□ -1.25
NUBP1P53384 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NUBP1P53384 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC7.25□□□□□ -1.25
NUBP1P53384 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 AOX3P-204ENST00000491025 2107 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 AC126773.4-201ENST00000612545 3043 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
NUBP1P53384 AP003972.1-201ENST00000625192 5446 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.25□□□□□ -1.25
NUBP1P53384 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
NUBP1P53384 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
NUBP1P53384 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 RNU6-1175P-201ENST00000365200 107 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 Y_RNA.412-201ENST00000384001 104 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 AL158156.1-201ENST00000422509 473 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC7.25□□□□□ -1.25
NUBP1P53384 AL590399.2-201ENST00000427536 309 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 MTATP6P4-201ENST00000427725 675 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 POU5F1P5-201ENST00000445059 658 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 AC097359.1-201ENST00000447946 463 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 AC087588.1-201ENST00000462203 316 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 RPS26P11-201ENST00000463445 348 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 RPS26P6-201ENST00000475156 348 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.25□□□□□ -1.25
NUBP1P53384 SNORA40.9-201ENST00000515895 93 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 RNU6-377P-201ENST00000515965 102 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 RN7SKP277-201ENST00000516895 283 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC7.25□□□□□ -1.25
NUBP1P53384 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.25□□□□□ -1.25
NUBP1P53384 NDUFB4P11-201ENST00000560510 395 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 MIR4679-2-201ENST00000578358 77 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 RN7SL199P-201ENST00000578752 281 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 RN7SL656P-201ENST00000579044 281 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 RN7SL270P-201ENST00000579643 281 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 RN7SL667P-201ENST00000582817 298 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC7.25□□□□□ -1.25
NUBP1P53384 AC006254.2-201ENST00000603259 279 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 AC089999.3-201ENST00000622440 577 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 SCARNA4-201ENST00000629045 128 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
NUBP1P53384 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
NUBP1P53384 AC005332.9-201ENST00000620266 2921 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.25□□□□□ -1.25
NUBP1P53384 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC7.25□□□□□ -1.25
NUBP1P53384 AC016251.2-201ENST00000623393 3089 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.25□□□□□ -1.25
NUBP1P53384 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.25□□□□□ -1.25
NUBP1P53384 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
NUBP1P53384 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NUBP1P53384 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NUBP1P53384 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.24□□□□□ -1.25
NUBP1P53384 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC7.24□□□□□ -1.25
NUBP1P53384 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
NUBP1P53384 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NUBP1P53384 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
NUBP1P53384 SMG1P7-201ENST00000565246 2704 ntBASIC7.24□□□□□ -1.25
NUBP1P53384 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NUBP1P53384 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.24□□□□□ -1.25
NUBP1P53384 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC7.24□□□□□ -1.25
NUBP1P53384 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
NUBP1P53384 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
NUBP1P53384 Y_RNA.182-201ENST00000363880 111 ntBASIC7.24□□□□□ -1.25
NUBP1P53384 RN7SKP78-201ENST00000364711 318 ntBASIC7.24□□□□□ -1.25
NUBP1P53384 UBA52P6-201ENST00000399822 382 ntBASIC7.24□□□□□ -1.25
NUBP1P53384 RNU2-2P-201ENST00000410396 191 ntBASIC7.24□□□□□ -1.25
NUBP1P53384 SSXP9-201ENST00000417503 292 ntBASIC7.24□□□□□ -1.25
NUBP1P53384 AC000089.1-201ENST00000424559 801 ntBASIC7.24□□□□□ -1.25
NUBP1P53384 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.24□□□□□ -1.25
NUBP1P53384 RN7SL362P-201ENST00000494228 267 ntBASIC7.24□□□□□ -1.25
NUBP1P53384 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.24□□□□□ -1.25
NUBP1P53384 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.24□□□□□ -1.25
NUBP1P53384 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms