Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC020634.1-201ENST00000608701 549 ntBASIC5.45□□□□□ -1.54
MRE11P49959 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.45□□□□□ -1.54
MRE11P49959 AC073348.1-201ENST00000623002 331 ntBASIC5.45□□□□□ -1.54
MRE11P49959 AC145207.9-201ENST00000623802 325 ntBASIC5.45□□□□□ -1.54
MRE11P49959 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.45□□□□□ -1.54
MRE11P49959 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.45□□□□□ -1.54
MRE11P49959 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.45□□□□□ -1.54
MRE11P49959 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.45□□□□□ -1.54
MRE11P49959 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.45□□□□□ -1.54
MRE11P49959 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.45□□□□□ -1.54
MRE11P49959 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.45□□□□□ -1.54
MRE11P49959 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MRE11P49959 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
MRE11P49959 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MRE11P49959 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
MRE11P49959 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.45□□□□□ -1.54
MRE11P49959 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MRE11P49959 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.44□□□□□ -1.54
MRE11P49959 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
MRE11P49959 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
MRE11P49959 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MRE11P49959 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.44□□□□□ -1.54
MRE11P49959 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MRE11P49959 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
MRE11P49959 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MRE11P49959 Y_RNA.88-201ENST00000363029 99 ntBASIC5.44□□□□□ -1.54
MRE11P49959 RNU5D-1-201ENST00000363299 116 ntBASIC5.44□□□□□ -1.54
MRE11P49959 SNORD74.4-201ENST00000364129 80 ntBASIC5.44□□□□□ -1.54
MRE11P49959 RNU6-1042P-201ENST00000384204 107 ntBASIC5.44□□□□□ -1.54
MRE11P49959 RPL32P23-201ENST00000397237 405 ntBASIC5.44□□□□□ -1.54
MRE11P49959 MTCO3P31-201ENST00000405526 789 ntBASIC5.44□□□□□ -1.54
MRE11P49959 VN1R8P-201ENST00000407739 893 ntBASIC5.44□□□□□ -1.54
MRE11P49959 RNU2-42P-201ENST00000410697 113 ntBASIC5.44□□□□□ -1.54
MRE11P49959 RN7SKP167-201ENST00000411047 285 ntBASIC5.44□□□□□ -1.54
MRE11P49959 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.44□□□□□ -1.54
MRE11P49959 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MRE11P49959 RPL31P54-201ENST00000429803 370 ntBASIC5.44□□□□□ -1.54
MRE11P49959 LARP1BP3-201ENST00000437229 869 ntBASIC5.44□□□□□ -1.54
MRE11P49959 AC091862.1-201ENST00000438016 1100 ntBASIC5.44□□□□□ -1.54
MRE11P49959 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
MRE11P49959 GEMIN8P3-201ENST00000445417 720 ntBASIC5.44□□□□□ -1.54
MRE11P49959 COX6CP12-201ENST00000446748 202 ntBASIC5.44□□□□□ -1.54
MRE11P49959 EPS15P1-201ENST00000448836 336 ntBASIC5.44□□□□□ -1.54
MRE11P49959 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.44□□□□□ -1.54
MRE11P49959 MTCO3P38-201ENST00000468910 766 ntBASIC5.44□□□□□ -1.54
MRE11P49959 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.44□□□□□ -1.54
MRE11P49959 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.44□□□□□ -1.54
MRE11P49959 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
MRE11P49959 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.44□□□□□ -1.54
MRE11P49959 PGBD4P4-201ENST00000509673 613 ntBASIC5.44□□□□□ -1.54
MRE11P49959 AC109464.2-201ENST00000510242 943 ntBASIC5.44□□□□□ -1.54
MRE11P49959 SAP18P1-201ENST00000512058 390 ntBASIC5.44□□□□□ -1.54
MRE11P49959 AC015795.1-201ENST00000513669 327 ntBASIC5.44□□□□□ -1.54
MRE11P49959 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.44□□□□□ -1.54
MRE11P49959 RN7SKP92-201ENST00000517266 244 ntBASIC5.44□□□□□ -1.54
MRE11P49959 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.44□□□□□ -1.54
MRE11P49959 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.44□□□□□ -1.54
MRE11P49959 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.44□□□□□ -1.54
MRE11P49959 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.44□□□□□ -1.54
MRE11P49959 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.44□□□□□ -1.54
MRE11P49959 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.44□□□□□ -1.54
MRE11P49959 MIR548S-201ENST00000581352 82 ntBASIC5.44□□□□□ -1.54
MRE11P49959 MIR3124-201ENST00000582636 67 ntBASIC5.44□□□□□ -1.54
MRE11P49959 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.44□□□□□ -1.54
MRE11P49959 AL357080.1-201ENST00000617394 239 ntBASIC5.44□□□□□ -1.54
MRE11P49959 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.44□□□□□ -1.54
MRE11P49959 AC093535.2-201ENST00000624769 2326 ntBASIC5.44□□□□□ -1.54
MRE11P49959 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MRE11P49959 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MRE11P49959 AL451142.2-201ENST00000429076 2090 ntBASIC5.44□□□□□ -1.54
MRE11P49959 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.44□□□□□ -1.54
MRE11P49959 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
MRE11P49959 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
MRE11P49959 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MRE11P49959 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MRE11P49959 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
MRE11P49959 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
MRE11P49959 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MRE11P49959 OR10J6P-201ENST00000289731 930 ntBASIC5.43□□□□□ -1.54
MRE11P49959 OR4G2P-201ENST00000328113 903 ntBASIC5.43□□□□□ -1.54
MRE11P49959 FGF7P2-201ENST00000332473 296 ntBASIC5.43□□□□□ -1.54
MRE11P49959 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
MRE11P49959 RN7SKP95-201ENST00000362860 303 ntBASIC5.43□□□□□ -1.54
MRE11P49959 RNU6-660P-201ENST00000364566 109 ntBASIC5.43□□□□□ -1.54
MRE11P49959 Y_RNA.302-201ENST00000364997 102 ntBASIC5.43□□□□□ -1.54
MRE11P49959 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.43□□□□□ -1.54
MRE11P49959 MIR217-201ENST00000384817 110 ntBASIC5.43□□□□□ -1.54
MRE11P49959 MIR513A2-201ENST00000385249 127 ntBASIC5.43□□□□□ -1.54
MRE11P49959 AL161909.1-201ENST00000397390 712 ntBASIC5.43□□□□□ -1.54
MRE11P49959 AL034374.1-201ENST00000406329 351 ntBASIC5.43□□□□□ -1.54
MRE11P49959 RNA5SP39-201ENST00000411245 120 ntBASIC5.43□□□□□ -1.54
MRE11P49959 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.43□□□□□ -1.54
MRE11P49959 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.43□□□□□ -1.54
MRE11P49959 Z93242.1-201ENST00000427102 353 ntBASIC5.43□□□□□ -1.54
MRE11P49959 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.43□□□□□ -1.54
MRE11P49959 AL451139.1-201ENST00000434718 346 ntBASIC5.43□□□□□ -1.54
MRE11P49959 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.43□□□□□ -1.54
MRE11P49959 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.43□□□□□ -1.54
MRE11P49959 AC104306.1-201ENST00000449702 371 ntBASIC5.43□□□□□ -1.54
MRE11P49959 DNAJC19P1-201ENST00000455312 319 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms