Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 HMGB1P19-201ENST00000517578 577 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 RPL23AP53-201ENST00000521854 457 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.4□□□□□ -1.54
CNGA1P29973 OR6C7P-201ENST00000547875 934 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.4□□□□□ -1.54
CNGA1P29973 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.4□□□□□ -1.54
CNGA1P29973 MIR3160-1-201ENST00000577972 85 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.4□□□□□ -1.54
CNGA1P29973 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.4□□□□□ -1.54
CNGA1P29973 U73023.1-201ENST00000603134 700 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 AC073091.2-201ENST00000603205 907 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 AL513477.2-201ENST00000607858 568 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 AC012360.2-201ENST00000609349 391 ntBASIC5.4□□□□□ -1.54
CNGA1P29973 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.4□□□□□ -1.54
CNGA1P29973 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNGA1P29973 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.4□□□□□ -1.55
CNGA1P29973 AL049555.1-201ENST00000562834 1933 ntBASIC5.4□□□□□ -1.55
CNGA1P29973 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNGA1P29973 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.4□□□□□ -1.55
CNGA1P29973 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNGA1P29973 MTND4P16-201ENST00000466108 1367 ntBASIC5.4□□□□□ -1.55
CNGA1P29973 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.4□□□□□ -1.55
CNGA1P29973 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNGA1P29973 AC135352.1-201ENST00000506173 1418 ntBASIC5.4□□□□□ -1.55
CNGA1P29973 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNGA1P29973 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.39□□□□□ -1.55
CNGA1P29973 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNGA1P29973 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
CNGA1P29973 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.39□□□□□ -1.55
CNGA1P29973 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CNGA1P29973 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNGA1P29973 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CNGA1P29973 AL672167.1-204ENST00000641875 3017 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
CNGA1P29973 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNGA1P29973 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNGA1P29973 AL121657.1-201ENST00000327215 531 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 U3.4-201ENST00000363352 213 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 RNU6-777P-201ENST00000364265 104 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 RNA5SP515-201ENST00000364570 118 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 RNA5SP509-201ENST00000364577 119 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CNGA1P29973 RNU6-952P-201ENST00000391164 108 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 SNORA57.1-201ENST00000391227 145 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CNGA1P29973 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.39□□□□□ -1.55
CNGA1P29973 CYCSP10-201ENST00000417973 294 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.39□□□□□ -1.55
CNGA1P29973 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.39□□□□□ -1.55
CNGA1P29973 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.39□□□□□ -1.55
CNGA1P29973 AL365184.2-201ENST00000431139 435 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.39□□□□□ -1.55
CNGA1P29973 AC122718.1-201ENST00000439448 744 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 AL831737.1-201ENST00000441288 271 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 MTND5P14-201ENST00000441481 1267 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.39□□□□□ -1.55
CNGA1P29973 COX6CP2-201ENST00000444980 225 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.39□□□□□ -1.55
CNGA1P29973 EPS15P1-201ENST00000448836 336 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 VN1R32P-201ENST00000452234 905 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 AC091564.1-201ENST00000464563 479 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 FAM133DP-201ENST00000464802 691 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 RPL31P50-201ENST00000471002 296 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 AC116337.2-201ENST00000477662 156 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.39□□□□□ -1.55
CNGA1P29973 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.39□□□□□ -1.55
CNGA1P29973 Y_RNA.655-201ENST00000515919 96 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 RNU1-6P-201ENST00000516290 144 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 RN7SKP234-201ENST00000517173 224 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.39□□□□□ -1.55
CNGA1P29973 OR5BC1P-201ENST00000529327 739 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.39□□□□□ -1.55
CNGA1P29973 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.39□□□□□ -1.55
CNGA1P29973 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.39□□□□□ -1.55
CNGA1P29973 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.39□□□□□ -1.55
CNGA1P29973 AC007224.1-201ENST00000564410 144 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 AC084783.1-201ENST00000565846 910 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 MIR5699-201ENST00000578903 90 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.39□□□□□ -1.55
CNGA1P29973 AC073544.2-201ENST00000601155 540 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 AL133338.2-201ENST00000604292 736 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 RN7SKP299-201ENST00000606679 301 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.39□□□□□ -1.55
CNGA1P29973 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNGA1P29973 OR56B2P-202ENST00000641377 2453 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CNGA1P29973 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.39□□□□□ -1.55
CNGA1P29973 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.39□□□□□ -1.55
CNGA1P29973 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.39□□□□□ -1.55
CNGA1P29973 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNGA1P29973 AL022578.1-201ENST00000439330 1433 ntBASIC5.39□□□□□ -1.55
CNGA1P29973 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CNGA1P29973 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNGA1P29973 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.39□□□□□ -1.55
CNGA1P29973 AC025031.4-201ENST00000621248 3271 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 ZNF33CP-201ENST00000432492 2030 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CNGA1P29973 PABPC1P9-201ENST00000426076 1612 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms