Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 MIR7154-201ENST00000620673 73 ntBASIC4.29□□□□□ -1.72
CTPS1P17812 MIR6810-201ENST00000622701 70 ntBASIC4.29□□□□□ -1.72
CTPS1P17812 AC019278.1-201ENST00000623516 479 ntBASIC4.29□□□□□ -1.72
CTPS1P17812 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTPS1P17812 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.29□□□□□ -1.72
CTPS1P17812 AC087359.1-201ENST00000508335 1740 ntBASIC4.29□□□□□ -1.72
CTPS1P17812 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CTPS1P17812 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTPS1P17812 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTPS1P17812 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 AC074029.4-201ENST00000624796 1859 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTPS1P17812 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTPS1P17812 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTPS1P17812 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTPS1P17812 OR4A15-201ENST00000314706 1035 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 RNU6-553P-201ENST00000364047 96 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 SNORA4.1-201ENST00000364263 144 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 RNA5SP366-201ENST00000365454 123 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.28□□□□□ -1.72
CTPS1P17812 SNORD116-1-201ENST00000384335 95 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTPS1P17812 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.28□□□□□ -1.72
CTPS1P17812 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 AL161631.1-201ENST00000417933 486 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 TIMM9P2-201ENST00000419324 266 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.28□□□□□ -1.72
CTPS1P17812 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.28□□□□□ -1.72
CTPS1P17812 RPL23AP38-201ENST00000423801 469 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.28□□□□□ -1.72
CTPS1P17812 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTPS1P17812 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.28□□□□□ -1.72
CTPS1P17812 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.28□□□□□ -1.72
CTPS1P17812 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.28□□□□□ -1.72
CTPS1P17812 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.28□□□□□ -1.72
CTPS1P17812 NUTF2P3-201ENST00000448540 384 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 ABCF2P2-201ENST00000450549 296 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 FGF7P3-201ENST00000454645 303 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 AC010618.1-201ENST00000469924 477 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 UQCRHP4-201ENST00000471686 272 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 AC013828.1-201ENST00000481845 158 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.28□□□□□ -1.72
CTPS1P17812 OR5BM1P-201ENST00000512021 366 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 MTCO3P28-201ENST00000513351 515 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 RNY4P37-201ENST00000516225 96 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 SNORA31.9-201ENST00000516429 84 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.28□□□□□ -1.72
CTPS1P17812 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.28□□□□□ -1.72
CTPS1P17812 OR5AK1P-201ENST00000524837 922 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 PTP4A1P6-201ENST00000531034 478 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.28□□□□□ -1.72
CTPS1P17812 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.28□□□□□ -1.72
CTPS1P17812 AC006064.5-201ENST00000541782 248 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.28□□□□□ -1.72
CTPS1P17812 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.28□□□□□ -1.72
CTPS1P17812 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.28□□□□□ -1.72
CTPS1P17812 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.28□□□□□ -1.72
CTPS1P17812 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.28□□□□□ -1.72
CTPS1P17812 AC124068.1-201ENST00000563131 678 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.28□□□□□ -1.72
CTPS1P17812 MTND6P33-201ENST00000571794 183 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 AL121834.1-201ENST00000572284 509 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.28□□□□□ -1.72
CTPS1P17812 AC124312.4-201ENST00000605533 310 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 AC122133.1-201ENST00000613964 233 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.28□□□□□ -1.72
CTPS1P17812 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.28□□□□□ -1.72
CTPS1P17812 MIR3653-201ENST00000625572 110 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.28□□□□□ -1.72
CTPS1P17812 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.28□□□□□ -1.72
CTPS1P17812 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CTPS1P17812 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CTPS1P17812 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.28□□□□□ -1.72
CTPS1P17812 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTPS1P17812 AC022893.2-201ENST00000564832 3296 ntBASIC4.28□□□□□ -1.72
CTPS1P17812 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CTPS1P17812 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CTPS1P17812 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTPS1P17812 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.73
CTPS1P17812 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTPS1P17812 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTPS1P17812 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTPS1P17812 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTPS1P17812 AL390862.1-201ENST00000635467 1469 ntBASIC4.27□□□□□ -1.73
CTPS1P17812 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTPS1P17812 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CTPS1P17812 RNU1-15P-201ENST00000353977 144 ntBASIC4.27□□□□□ -1.73
CTPS1P17812 MIR383-201ENST00000362257 73 ntBASIC4.27□□□□□ -1.73
CTPS1P17812 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTPS1P17812 RNU6-253P-201ENST00000384730 105 ntBASIC4.27□□□□□ -1.73
CTPS1P17812 MIR506-201ENST00000384998 124 ntBASIC4.27□□□□□ -1.73
CTPS1P17812 MIR1284-201ENST00000408337 120 ntBASIC4.27□□□□□ -1.73
CTPS1P17812 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.27□□□□□ -1.73
CTPS1P17812 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.27□□□□□ -1.73
CTPS1P17812 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.27□□□□□ -1.73
CTPS1P17812 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.27□□□□□ -1.73
CTPS1P17812 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.27□□□□□ -1.73
CTPS1P17812 AC234779.1-201ENST00000425910 285 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms