Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL354692.1-201ENST00000423044 315 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.08□□□□□ -1.76
PDGFRAP16234 Z93242.1-201ENST00000427102 353 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFRAP16234 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.08□□□□□ -1.76
PDGFRAP16234 RPS17P13-201ENST00000448974 407 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.08□□□□□ -1.76
PDGFRAP16234 AC069499.1-201ENST00000489433 509 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 RPL5P23-201ENST00000496040 868 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 CAB39P1-201ENST00000502277 460 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 RNU6-885P-201ENST00000516607 104 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.08□□□□□ -1.76
PDGFRAP16234 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.08□□□□□ -1.76
PDGFRAP16234 AC092747.2-201ENST00000545069 983 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.08□□□□□ -1.76
PDGFRAP16234 AC006270.2-201ENST00000578523 652 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.08□□□□□ -1.76
PDGFRAP16234 BDP1P-201ENST00000582658 1990 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.08□□□□□ -1.76
PDGFRAP16234 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.08□□□□□ -1.76
PDGFRAP16234 AC012531.5-201ENST00000611375 151 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFRAP16234 AC121761.2-201ENST00000617300 689 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFRAP16234 AL161637.1-201ENST00000622380 412 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 AC073530.2-201ENST00000623987 261 ntBASIC4.08□□□□□ -1.76
PDGFRAP16234 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.08□□□□□ -1.76
PDGFRAP16234 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFRAP16234 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFRAP16234 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFRAP16234 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFRAP16234 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFRAP16234 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFRAP16234 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.08□□□□□ -1.76
PDGFRAP16234 AC018555.1-201ENST00000567548 1980 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 PABPC1P7-201ENST00000413177 1513 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFRAP16234 AL355578.1-201ENST00000607405 1328 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.07□□□□□ -1.76
PDGFRAP16234 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFRAP16234 HMGB1P5-201ENST00000255320 642 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFRAP16234 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFRAP16234 SSXP10-201ENST00000402595 565 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AL079342.2-201ENST00000403367 482 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 C1DP1-201ENST00000426049 402 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 ATP5HP2-201ENST00000433885 485 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFRAP16234 AC122718.1-201ENST00000439448 744 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.07□□□□□ -1.76
PDGFRAP16234 AL590399.6-201ENST00000446396 307 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 FAM133DP-201ENST00000464802 691 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 TRAV31-201ENST00000502780 342 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 USP9YP5-201ENST00000511770 630 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AC093752.1-206ENST00000511823 336 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AC023141.12-201ENST00000512399 199 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 MTND4LP31-201ENST00000514859 294 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 RNU6-276P-201ENST00000516114 96 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AC008802.1-201ENST00000519121 791 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFRAP16234 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFRAP16234 ARL2BPP5-201ENST00000523141 481 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AP000790.1-201ENST00000528891 737 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFRAP16234 AP004242.1-201ENST00000533701 349 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFRAP16234 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFRAP16234 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFRAP16234 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFRAP16234 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.07□□□□□ -1.76
PDGFRAP16234 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFRAP16234 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFRAP16234 AC112220.2-201ENST00000605513 533 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.07□□□□□ -1.76
PDGFRAP16234 AC068722.2-201ENST00000618734 544 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AL157770.1-201ENST00000623049 439 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AC104985.3-201ENST00000623479 597 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AL512506.2-201ENST00000624472 458 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 AL445984.1-201ENST00000637834 659 ntBASIC4.07□□□□□ -1.76
PDGFRAP16234 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.07□□□□□ -1.76
PDGFRAP16234 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFRAP16234 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFRAP16234 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.06□□□□□ -1.76
PDGFRAP16234 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PDGFRAP16234 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFRAP16234 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.06□□□□□ -1.76
PDGFRAP16234 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFRAP16234 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 RNU6-251P-201ENST00000363235 104 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 RNA5SP97-201ENST00000365006 84 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 MIR122-201ENST00000385044 85 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.06□□□□□ -1.76
PDGFRAP16234 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.06□□□□□ -1.76
PDGFRAP16234 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.06□□□□□ -1.76
PDGFRAP16234 AC114973.1-201ENST00000429057 632 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 CKS1BP5-201ENST00000434172 273 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFRAP16234 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.06□□□□□ -1.76
PDGFRAP16234 AL356535.1-201ENST00000440335 398 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms