| MUC1 | P15941 | AC055764.2-201 | ENST00000610089 | 670 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MUC1 | P15941 | SLC5A3-201 | ENST00000381151 | 11576 nt | APPRIS P1 TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| MUC1 | P15941 | CCDC54-201 | ENST00000261058 | 1444 nt | APPRIS P1 BASIC | 3 | □□□□□ -1.93 | | |
| MUC1 | P15941 | MFSD8-233 | ENST00000641482 | 4860 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LINC01085-201 | ENST00000502759 | 1984 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| MUC1 | P15941 | ATP2B1-203 | ENST00000393164 | 3127 nt | TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | RNF17-201 | ENST00000255324 | 5119 nt | APPRIS P1 TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | SLC8A1-207 | ENST00000406785 | 20987 nt | TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | NMD3P1-201 | ENST00000439704 | 1488 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | RPL9-201 | ENST00000295955 | 750 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | QKI-202 | ENST00000361195 | 1063 nt | TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | RNA5SP42-201 | ENST00000364278 | 115 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | DNAH14-203 | ENST00000366848 | 929 nt | TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | CFHR1-202 | ENST00000367424 | 1070 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | SEC61A2-203 | ENST00000379017 | 600 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | MIR142-201 | ENST00000384835 | 87 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | MIR200C-201 | ENST00000384980 | 68 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | TRAJ17-201 | ENST00000390520 | 63 nt | APPRIS P1 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | HMGB1P10-201 | ENST00000395823 | 563 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | DEFB133-201 | ENST00000398721 | 186 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC105402.1-201 | ENST00000413336 | 545 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC126124.2-201 | ENST00000413542 | 321 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LINC01347-201 | ENST00000417964 | 355 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC023128.2-201 | ENST00000420880 | 1223 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | MTCO2P1-201 | ENST00000424648 | 477 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | OSTCP5-201 | ENST00000425293 | 453 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AL353705.1-201 | ENST00000433468 | 480 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | ZNF736P6Y-201 | ENST00000447526 | 1213 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC107072.2-201 | ENST00000452412 | 555 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | RN7SL594P-201 | ENST00000470590 | 287 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC106707.2-201 | ENST00000484182 | 374 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC005726.1-201 | ENST00000494679 | 427 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC020893.1-201 | ENST00000502452 | 580 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LINC01017-201 | ENST00000508823 | 768 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LINC01218-201 | ENST00000515150 | 481 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LINC01603-201 | ENST00000517343 | 1134 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC090539.1-201 | ENST00000523907 | 434 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AKAP7-208 | ENST00000537868 | 1006 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC079362.1-201 | ENST00000546865 | 525 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | OR6C68-201 | ENST00000548615 | 939 nt | APPRIS P1 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC089983.1-201 | ENST00000549807 | 701 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LINC02258-201 | ENST00000551280 | 777 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LINC00519-201 | ENST00000557518 | 682 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC068714.1-201 | ENST00000559623 | 800 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC034105.4-201 | ENST00000568304 | 277 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC145207.6-201 | ENST00000579981 | 782 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC098483.2-201 | ENST00000603158 | 454 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC243829.4-202 | ENST00000610845 | 410 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC039056.2-201 | ENST00000622261 | 511 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | SATB1-AS1-237 | ENST00000626982 | 735 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AL034408.1-202 | ENST00000636088 | 415 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | UBA5-201 | ENST00000264991 | 2850 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | OR51L1-203 | ENST00000641819 | 7300 nt | APPRIS P1 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | UGT2B10-202 | ENST00000458688 | 1424 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | MTND5P7-201 | ENST00000413558 | 1798 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | PKN2-AS1-202 | ENST00000458097 | 3542 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | IFI16-203 | ENST00000359709 | 2609 nt | APPRIS ALT2 TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC007256.1-201 | ENST00000392253 | 2765 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | CREBRF-201 | ENST00000296953 | 7778 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LRRC39-201 | ENST00000342895 | 1881 nt | APPRIS P1 TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| MUC1 | P15941 | ESCO1-201 | ENST00000269214 | 4523 nt | APPRIS P1 TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | RTTN-201 | ENST00000255674 | 6960 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC128685.1-201 | ENST00000490357 | 1834 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AL355578.1-201 | ENST00000607405 | 1328 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | ARHGAP28-202 | ENST00000314319 | 5415 nt | APPRIS P2 TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | C8orf22-201 | ENST00000303202 | 1499 nt | TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | DST-204 | ENST00000361203 | 22431 nt | APPRIS ALT2 TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | ASB17-201 | ENST00000284142 | 1107 nt | APPRIS P1 TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | ATF1P1-201 | ENST00000406040 | 927 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AL583834.1-201 | ENST00000406943 | 343 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | RNA5SP107-201 | ENST00000411358 | 122 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | UBE2D3P3-201 | ENST00000426992 | 425 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LINC00411-201 | ENST00000436722 | 461 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LINC01967-202 | ENST00000437506 | 515 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LINC01317-202 | ENST00000442026 | 677 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | C1orf143-201 | ENST00000443836 | 762 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | RPS27P5-201 | ENST00000444247 | 244 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AL355592.1-201 | ENST00000450292 | 386 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AL353148.1-203 | ENST00000452286 | 665 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC091564.1-201 | ENST00000464563 | 479 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC121764.2-201 | ENST00000469806 | 587 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC015908.1-201 | ENST00000478739 | 476 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC005912.1-201 | ENST00000495392 | 255 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC109349.1-201 | ENST00000503299 | 758 nt | TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | RNA5SP385-201 | ENST00000515947 | 110 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC026403.1-201 | ENST00000518938 | 295 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LINC01609-201 | ENST00000519506 | 424 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC109466.1-204 | ENST00000519570 | 717 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC113192.3-201 | ENST00000529152 | 742 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | ZNF84-212 | ENST00000542874 | 540 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | CR383656.14-201 | ENST00000551951 | 406 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC027514.2-201 | ENST00000591014 | 637 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC098617.1-215 | ENST00000594798 | 1152 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | LINC02098-201 | ENST00000608492 | 475 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | ADPRM-204 | ENST00000609540 | 1138 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC084824.5-201 | ENST00000612009 | 413 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | MIR8084-201 | ENST00000614105 | 89 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AC253576.2-201 | ENST00000618815 | 580 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | GPR34-203 | ENST00000620846 | 1282 nt | TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| MUC1 | P15941 | AL161637.1-201 | ENST00000622380 | 412 nt | BASIC | 2.98 | □□□□□ -1.93 | | |