Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CFTRP13569 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CFTRP13569 LINC01355-201ENST00000566551 5444 ntBASIC4.79□□□□□ -1.64
CFTRP13569 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CFTRP13569 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CFTRP13569 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CFTRP13569 RPS4XP7-201ENST00000406274 780 ntBASIC4.78□□□□□ -1.64
CFTRP13569 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.78□□□□□ -1.64
CFTRP13569 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.78□□□□□ -1.64
CFTRP13569 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CFTRP13569 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CFTRP13569 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CFTRP13569 LAP3P1-201ENST00000403648 294 ntBASIC4.77□□□□□ -1.65
CFTRP13569 AL603825.1-201ENST00000438481 80 ntBASIC4.77□□□□□ -1.65
CFTRP13569 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
CFTRP13569 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.77□□□□□ -1.65
CFTRP13569 EEF1A1P37-201ENST00000522748 715 ntBASIC4.77□□□□□ -1.65
CFTRP13569 AP000873.5-201ENST00000533906 236 ntBASIC4.77□□□□□ -1.65
CFTRP13569 AP002770.2-201ENST00000543613 532 ntBASIC4.77□□□□□ -1.65
CFTRP13569 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CFTRP13569 AC018690.1-201ENST00000608144 626 ntBASIC4.77□□□□□ -1.65
CFTRP13569 AC016590.3-201ENST00000611171 753 ntBASIC4.77□□□□□ -1.65
CFTRP13569 AC027287.1-201ENST00000553115 1453 ntBASIC4.77□□□□□ -1.65
CFTRP13569 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CFTRP13569 RN7SKP58-201ENST00000411010 305 ntBASIC4.76□□□□□ -1.65
CFTRP13569 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.76□□□□□ -1.65
CFTRP13569 OR2AS1P-201ENST00000427827 319 ntBASIC4.76□□□□□ -1.65
CFTRP13569 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.76□□□□□ -1.65
CFTRP13569 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.76□□□□□ -1.65
CFTRP13569 AC078817.1-201ENST00000492623 435 ntBASIC4.76□□□□□ -1.65
CFTRP13569 RPS29P21-201ENST00000496272 170 ntBASIC4.76□□□□□ -1.65
CFTRP13569 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.76□□□□□ -1.65
CFTRP13569 AC008507.1-201ENST00000587506 734 ntBASIC4.76□□□□□ -1.65
CFTRP13569 CTSLP2-204ENST00000629029 392 ntBASIC4.76□□□□□ -1.65
CFTRP13569 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CFTRP13569 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CFTRP13569 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CFTRP13569 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CFTRP13569 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CFTRP13569 RNA5SP289-201ENST00000362332 137 ntBASIC4.75□□□□□ -1.65
CFTRP13569 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CFTRP13569 WASF1P1-201ENST00000447560 1131 ntBASIC4.75□□□□□ -1.65
CFTRP13569 RPL23AP23-201ENST00000452590 471 ntBASIC4.75□□□□□ -1.65
CFTRP13569 AP000942.1-201ENST00000463969 747 ntBASIC4.75□□□□□ -1.65
CFTRP13569 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.75□□□□□ -1.65
CFTRP13569 FABP5P12-201ENST00000515543 389 ntBASIC4.75□□□□□ -1.65
CFTRP13569 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.75□□□□□ -1.65
CFTRP13569 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.75□□□□□ -1.65
CFTRP13569 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.75□□□□□ -1.65
CFTRP13569 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CFTRP13569 RPL30P2-201ENST00000414021 291 ntBASIC4.75□□□□□ -1.65
CFTRP13569 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.75□□□□□ -1.65
CFTRP13569 MTCO1P52-201ENST00000433928 531 ntBASIC4.75□□□□□ -1.65
CFTRP13569 snoU13.23-201ENST00000458863 104 ntBASIC4.75□□□□□ -1.65
CFTRP13569 SNORA31.21-201ENST00000517180 77 ntBASIC4.75□□□□□ -1.65
CFTRP13569 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.75□□□□□ -1.65
CFTRP13569 AL390334.1-201ENST00000556395 450 ntBASIC4.75□□□□□ -1.65
CFTRP13569 AC092608.2-201ENST00000624427 218 ntBASIC4.75□□□□□ -1.65
CFTRP13569 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.74□□□□□ -1.65
CFTRP13569 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.74□□□□□ -1.65
CFTRP13569 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CFTRP13569 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CFTRP13569 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CFTRP13569 AC008725.1-201ENST00000605123 2263 ntBASIC4.74□□□□□ -1.65
CFTRP13569 RNU1-75P-201ENST00000347264 129 ntBASIC4.74□□□□□ -1.65
CFTRP13569 MIR764-201ENST00000390811 85 ntBASIC4.74□□□□□ -1.65
CFTRP13569 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.74□□□□□ -1.65
CFTRP13569 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.74□□□□□ -1.65
CFTRP13569 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.74□□□□□ -1.65
CFTRP13569 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.74□□□□□ -1.65
CFTRP13569 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
CFTRP13569 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.74□□□□□ -1.65
CFTRP13569 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.74□□□□□ -1.65
CFTRP13569 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.74□□□□□ -1.65
CFTRP13569 AL158827.2-201ENST00000602494 330 ntBASIC4.74□□□□□ -1.65
CFTRP13569 AL691447.3-201ENST00000635020 330 ntBASIC4.74□□□□□ -1.65
CFTRP13569 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.73□□□□□ -1.65
CFTRP13569 MIR518C-201ENST00000384822 101 ntBASIC4.73□□□□□ -1.65
CFTRP13569 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CFTRP13569 OR6C64P-201ENST00000419708 825 ntBASIC4.73□□□□□ -1.65
CFTRP13569 AL049610.1-201ENST00000423374 372 ntBASIC4.73□□□□□ -1.65
CFTRP13569 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.73□□□□□ -1.65
CFTRP13569 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.73□□□□□ -1.65
CFTRP13569 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.73□□□□□ -1.65
CFTRP13569 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.73□□□□□ -1.65
CFTRP13569 RN7SKP283-201ENST00000517197 270 ntBASIC4.73□□□□□ -1.65
CFTRP13569 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.73□□□□□ -1.65
CFTRP13569 AC012020.1-201ENST00000624541 1728 ntBASIC4.73□□□□□ -1.65
CFTRP13569 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CFTRP13569 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.72□□□□□ -1.65
CFTRP13569 AC092079.1-201ENST00000558620 1985 ntBASIC4.72□□□□□ -1.65
CFTRP13569 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CFTRP13569 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CFTRP13569 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.72□□□□□ -1.65
CFTRP13569 RNA5SP274-201ENST00000410484 108 ntBASIC4.72□□□□□ -1.65
CFTRP13569 RPS20P5-201ENST00000434808 360 ntBASIC4.72□□□□□ -1.65
CFTRP13569 AL513043.1-201ENST00000439124 535 ntBASIC4.72□□□□□ -1.65
CFTRP13569 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.72□□□□□ -1.65
CFTRP13569 SNRPGP5-201ENST00000456003 220 ntBASIC4.72□□□□□ -1.65
CFTRP13569 RN7SL330P-201ENST00000469709 307 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms