Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC006963.1-201ENST00000624003 1052 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.18□□□□□ -1.9
UBCP0CG48 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.18□□□□□ -1.9
UBCP0CG48 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.18□□□□□ -1.9
UBCP0CG48 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.18□□□□□ -1.9
UBCP0CG48 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
UBCP0CG48 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
UBCP0CG48 AC002546.1-201ENST00000588041 2504 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBCP0CG48 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.17□□□□□ -1.9
UBCP0CG48 AL136164.4-201ENST00000625013 2135 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBCP0CG48 SPRR2C-201ENST00000290702 219 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBCP0CG48 RNU1-75P-201ENST00000347264 129 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 AP002088.1-201ENST00000382740 395 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 RNU6-444P-201ENST00000383988 108 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 MT-TC-201ENST00000387405 66 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
UBCP0CG48 RNU6-796P-201ENST00000391086 107 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.17□□□□□ -1.9
UBCP0CG48 AL583834.1-201ENST00000406943 343 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 RNA5SP56-201ENST00000410277 118 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.17□□□□□ -1.9
UBCP0CG48 AL158825.1-201ENST00000414735 521 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.17□□□□□ -1.9
UBCP0CG48 ZFAND6P1-201ENST00000434138 605 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.17□□□□□ -1.9
UBCP0CG48 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.17□□□□□ -1.9
UBCP0CG48 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.17□□□□□ -1.9
UBCP0CG48 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.17□□□□□ -1.9
UBCP0CG48 snoU13.24-201ENST00000458998 104 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.17□□□□□ -1.9
UBCP0CG48 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.17□□□□□ -1.9
UBCP0CG48 AL024509.2-201ENST00000493462 493 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.17□□□□□ -1.9
UBCP0CG48 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.17□□□□□ -1.9
UBCP0CG48 MTCO2P32-201ENST00000514865 403 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 RN7SKP122-201ENST00000515923 296 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 SCARNA14-201ENST00000516903 136 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 HIGD1AP6-201ENST00000521833 279 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.17□□□□□ -1.9
UBCP0CG48 AP003385.6-201ENST00000531603 374 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.17□□□□□ -1.9
UBCP0CG48 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.17□□□□□ -1.9
UBCP0CG48 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.17□□□□□ -1.9
UBCP0CG48 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.17□□□□□ -1.9
UBCP0CG48 AC012254.4-201ENST00000588843 273 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 AL450270.1-201ENST00000606160 391 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 AC021851.1-201ENST00000608537 1082 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 AC006338.2-201ENST00000616864 791 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.17□□□□□ -1.9
UBCP0CG48 MIR6830-201ENST00000636015 70 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBCP0CG48 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBCP0CG48 AC073073.2-201ENST00000609827 2578 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBCP0CG48 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBCP0CG48 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.17□□□□□ -1.9
UBCP0CG48 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBCP0CG48 AC118273.1-201ENST00000525324 3006 ntBASIC3.17□□□□□ -1.9
UBCP0CG48 AL513302.2-201ENST00000562313 1842 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.16□□□□□ -1.9
UBCP0CG48 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBCP0CG48 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBCP0CG48 MTCO1P6-201ENST00000481192 1384 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.16□□□□□ -1.9
UBCP0CG48 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBCP0CG48 SNORA73.2-201ENST00000364946 201 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 RNU1-13P-201ENST00000384499 162 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
UBCP0CG48 U3.39-201ENST00000408569 239 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 PAICSP7-201ENST00000419829 962 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.16□□□□□ -1.9
UBCP0CG48 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBCP0CG48 AC114973.1-201ENST00000429057 632 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 AL117339.2-201ENST00000430475 180 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 BX679664.1-201ENST00000434429 253 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 RPS7P2-201ENST00000435134 607 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.16□□□□□ -1.9
UBCP0CG48 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.16□□□□□ -1.9
UBCP0CG48 RPL21P89-201ENST00000444021 467 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.16□□□□□ -1.9
UBCP0CG48 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.16□□□□□ -1.9
UBCP0CG48 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.16□□□□□ -1.9
UBCP0CG48 HSFY6P-201ENST00000445573 403 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.16□□□□□ -1.9
UBCP0CG48 SBDSP1-204ENST00000453858 737 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 PTGES3P5-201ENST00000455109 434 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 RN7SL442P-201ENST00000473804 320 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 AC108729.2-201ENST00000476543 840 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.16□□□□□ -1.9
UBCP0CG48 AL139099.1-201ENST00000497398 403 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 AC021146.5-201ENST00000503544 545 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 AC010460.1-201ENST00000507087 466 ntBASIC3.16□□□□□ -1.9
UBCP0CG48 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBCP0CG48 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms