Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PTP4A1P6-201ENST00000531034 478 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AC092474.3-201ENST00000603022 568 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AC011816.2-201ENST00000607089 556 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AC096586.1-201ENST00000610267 561 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 MIR8084-201ENST00000614105 89 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 VN1R9P-201ENST00000614184 867 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AC069209.1-201ENST00000619282 651 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 CR392039.5-201ENST00000623201 510 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AP003400.6-201ENST00000624698 740 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AC097372.4-201ENST00000625025 466 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 EXOC5P1-201ENST00000510543 1969 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 AL512283.1-201ENST00000606756 1384 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 NSRP1P1-201ENST00000444067 1693 ntBASIC3.08□□□□□ -1.92
HLA-DPB1P04440 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DPB1P04440 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 SEC63P2-201ENST00000503863 1939 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC016716.1-201ENST00000265882 708 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 RNA5SP239-201ENST00000410218 129 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 RN7SKP53-201ENST00000411337 315 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AL606495.1-201ENST00000422100 813 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AL049610.1-201ENST00000423374 372 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 FTH1P6-201ENST00000430768 320 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 YWHAZP8-201ENST00000436935 731 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 FABP5P3-201ENST00000437960 408 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 UBE2V1P5-201ENST00000440070 405 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC008264.1-201ENST00000447612 367 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC097262.1-201ENST00000452559 548 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC018635.1-201ENST00000468292 1030 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC078857.1-201ENST00000469870 667 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC087385.1-201ENST00000475062 312 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AP000926.1-201ENST00000479573 241 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC108078.3-201ENST00000502633 489 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 OR5H3P-201ENST00000502817 919 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC104619.4-201ENST00000510773 249 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC027338.1-201ENST00000514840 825 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 RNU1-95P-201ENST00000516357 160 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 RNU1-128P-201ENST00000516704 160 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 RN7SKP82-201ENST00000516786 223 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 TRMT10BP1-201ENST00000519377 943 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 MTND2P26-201ENST00000528255 1029 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AL442163.2-201ENST00000553912 710 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC034105.4-201ENST00000568304 277 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 RN7SL622P-201ENST00000585292 275 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 VN1R79P-201ENST00000593540 513 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 MIR6864-201ENST00000617935 70 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AC018926.3-201ENST00000618841 406 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 MTND4P8-201ENST00000514997 1362 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AL136964.1-201ENST00000622038 2990 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 AL592494.2-201ENST00000425455 1548 ntBASIC3.07□□□□□ -1.92
HLA-DPB1P04440 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DPB1P04440 OTUD4P1-201ENST00000237841 3067 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 SNORD9-201ENST00000362566 104 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 SNORA5A-201ENST00000384111 134 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DPB1P04440 AC093422.3-201ENST00000428506 305 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 MTND5P27-201ENST00000428871 1720 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 MTCO1P43-201ENST00000431831 488 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 GOT2P5-201ENST00000433995 546 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 HMGB1P45-201ENST00000435986 653 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 RPL7P55-201ENST00000450522 746 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DPB1P04440 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DPB1P04440 SAP18P1-201ENST00000512058 390 ntBASIC3.06□□□□□ -1.92
HLA-DPB1P04440 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms