Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PWAR6-201ENST00000552334 4618 ntBASIC3.55□□□□□ -1.84
COL1A1P02452 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL1A1P02452 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL1A1P02452 RNU4-82P-201ENST00000362443 140 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 U3.11-201ENST00000364476 212 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
COL1A1P02452 AL445529.1-201ENST00000398713 389 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 U3.42-201ENST00000408746 214 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 AL139413.1-201ENST00000421309 217 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 AC073508.1-201ENST00000428866 656 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 METTL15P1-201ENST00000481421 1045 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 AL035404.1-201ENST00000497982 568 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.54□□□□□ -1.84
COL1A1P02452 SNORA64.4-201ENST00000516632 81 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 AC107918.3-201ENST00000533272 382 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.54□□□□□ -1.84
COL1A1P02452 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.54□□□□□ -1.84
COL1A1P02452 AC011492.1-201ENST00000600023 315 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 NRBF2P5-201ENST00000603087 788 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 AL591516.1-201ENST00000611326 274 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 PLCE1P1-201ENST00000622094 305 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 AP003499.2-201ENST00000624100 483 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.54□□□□□ -1.84
COL1A1P02452 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
COL1A1P02452 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
COL1A1P02452 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL1A1P02452 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL1A1P02452 AC004972.1-201ENST00000623934 2209 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 GABRG2-229ENST00000641017 3628 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 RN7SKP222-201ENST00000410651 315 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 AC245291.1-201ENST00000419501 328 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.54□□□□□ -1.84
COL1A1P02452 AC063976.3-201ENST00000426849 329 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 MTND6P18-201ENST00000439477 513 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 AC108938.1-201ENST00000451204 136 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.54□□□□□ -1.84
COL1A1P02452 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.54□□□□□ -1.84
COL1A1P02452 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.54□□□□□ -1.84
COL1A1P02452 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL1A1P02452 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.54□□□□□ -1.84
COL1A1P02452 AC231759.1-201ENST00000616455 597 ntBASIC3.54□□□□□ -1.84
COL1A1P02452 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL1A1P02452 AC107081.3-201ENST00000612715 2034 ntBASIC3.53□□□□□ -1.84
COL1A1P02452 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL1A1P02452 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.53□□□□□ -1.84
COL1A1P02452 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.53□□□□□ -1.84
COL1A1P02452 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL1A1P02452 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL1A1P02452 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL1A1P02452 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.53□□□□□ -1.84
COL1A1P02452 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.53□□□□□ -1.84
COL1A1P02452 FTH1P1-201ENST00000437933 532 ntBASIC3.53□□□□□ -1.84
COL1A1P02452 SNRPFP2-201ENST00000440710 251 ntBASIC3.53□□□□□ -1.84
COL1A1P02452 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.53□□□□□ -1.84
COL1A1P02452 NIPA2P5-201ENST00000452282 464 ntBASIC3.53□□□□□ -1.84
COL1A1P02452 RN7SL432P-201ENST00000484057 298 ntBASIC3.53□□□□□ -1.84
COL1A1P02452 AC111000.2-201ENST00000507775 550 ntBASIC3.53□□□□□ -1.84
COL1A1P02452 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.53□□□□□ -1.84
COL1A1P02452 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.53□□□□□ -1.84
COL1A1P02452 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL1A1P02452 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.53□□□□□ -1.84
COL1A1P02452 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.53□□□□□ -1.84
COL1A1P02452 HMGB1P6-201ENST00000569046 646 ntBASIC3.53□□□□□ -1.84
COL1A1P02452 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.53□□□□□ -1.84
COL1A1P02452 MIR4769-201ENST00000584126 77 ntBASIC3.53□□□□□ -1.84
COL1A1P02452 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.53□□□□□ -1.84
COL1A1P02452 AL356490.1-201ENST00000623079 479 ntBASIC3.53□□□□□ -1.84
COL1A1P02452 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.52□□□□□ -1.85
COL1A1P02452 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL1A1P02452 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL1A1P02452 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.52□□□□□ -1.85
COL1A1P02452 RNA5SP383-201ENST00000362934 120 ntBASIC3.52□□□□□ -1.85
COL1A1P02452 U3.6-201ENST00000363622 211 ntBASIC3.52□□□□□ -1.85
COL1A1P02452 AL512430.2-201ENST00000406786 339 ntBASIC3.52□□□□□ -1.85
COL1A1P02452 AL583834.1-201ENST00000406943 343 ntBASIC3.52□□□□□ -1.85
COL1A1P02452 BTF3P9-201ENST00000418784 283 ntBASIC3.52□□□□□ -1.85
COL1A1P02452 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.52□□□□□ -1.85
COL1A1P02452 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.52□□□□□ -1.85
COL1A1P02452 SLC31A1P1-201ENST00000451221 567 ntBASIC3.52□□□□□ -1.85
COL1A1P02452 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.52□□□□□ -1.85
COL1A1P02452 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.52□□□□□ -1.85
COL1A1P02452 RPS17P11-201ENST00000474297 293 ntBASIC3.52□□□□□ -1.85
COL1A1P02452 AC138761.3-201ENST00000579993 334 ntBASIC3.52□□□□□ -1.85
COL1A1P02452 MIR4435-1-201ENST00000582552 80 ntBASIC3.52□□□□□ -1.85
COL1A1P02452 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.52□□□□□ -1.85
COL1A1P02452 AC112503.1-201ENST00000608436 391 ntBASIC3.52□□□□□ -1.85
COL1A1P02452 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL1A1P02452 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL1A1P02452 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.51□□□□□ -1.85
COL1A1P02452 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL1A1P02452 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL1A1P02452 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.51□□□□□ -1.85
COL1A1P02452 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL1A1P02452 SNORA46-201ENST00000384762 135 ntBASIC3.51□□□□□ -1.85
COL1A1P02452 AL031679.1-201ENST00000400616 525 ntBASIC3.51□□□□□ -1.85
COL1A1P02452 AC106901.1-201ENST00000425086 698 ntBASIC3.51□□□□□ -1.85
COL1A1P02452 AC087499.2-201ENST00000432861 149 ntBASIC3.51□□□□□ -1.85
COL1A1P02452 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.51□□□□□ -1.85
COL1A1P02452 HMGB3P8-201ENST00000449709 577 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms