Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SNRPBP1-201ENST00000443634 282 ntBASIC6.94□□□□□ -1.3
RNF40O75150 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.94□□□□□ -1.3
RNF40O75150 RPL23AP28-201ENST00000448062 470 ntBASIC6.94□□□□□ -1.3
RNF40O75150 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.94□□□□□ -1.3
RNF40O75150 RN7SL413P-201ENST00000482700 297 ntBASIC6.94□□□□□ -1.3
RNF40O75150 AC108860.1-201ENST00000484521 383 ntBASIC6.94□□□□□ -1.3
RNF40O75150 HSD3BP3-201ENST00000514706 994 ntBASIC6.94□□□□□ -1.3
RNF40O75150 RNU6-570P-201ENST00000517051 105 ntBASIC6.94□□□□□ -1.3
RNF40O75150 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.94□□□□□ -1.3
RNF40O75150 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.94□□□□□ -1.3
RNF40O75150 SNRPCP6-201ENST00000528310 210 ntBASIC6.94□□□□□ -1.3
RNF40O75150 HMGB1P42-201ENST00000532126 553 ntBASIC6.94□□□□□ -1.3
RNF40O75150 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.94□□□□□ -1.3
RNF40O75150 AP002770.2-201ENST00000543613 532 ntBASIC6.94□□□□□ -1.3
RNF40O75150 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC6.94□□□□□ -1.3
RNF40O75150 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.94□□□□□ -1.3
RNF40O75150 AC090517.1-201ENST00000569307 266 ntBASIC6.94□□□□□ -1.3
RNF40O75150 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.94□□□□□ -1.3
RNF40O75150 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.94□□□□□ -1.3
RNF40O75150 AC145423.1-201ENST00000605712 336 ntBASIC6.94□□□□□ -1.3
RNF40O75150 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.94□□□□□ -1.3
RNF40O75150 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.94□□□□□ -1.3
RNF40O75150 AC055839.1-201ENST00000634467 498 ntBASIC6.94□□□□□ -1.3
RNF40O75150 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
RNF40O75150 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF40O75150 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.94□□□□□ -1.3
RNF40O75150 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF40O75150 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.94□□□□□ -1.3
RNF40O75150 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF40O75150 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF40O75150 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF40O75150 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF40O75150 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF40O75150 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF40O75150 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
RNF40O75150 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF40O75150 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF40O75150 RNA5SP258-201ENST00000362750 119 ntBASIC6.93□□□□□ -1.3
RNF40O75150 RNU6-1287P-201ENST00000362914 107 ntBASIC6.93□□□□□ -1.3
RNF40O75150 Y_RNA.81-201ENST00000362997 102 ntBASIC6.93□□□□□ -1.3
RNF40O75150 RN7SKP162-201ENST00000363605 345 ntBASIC6.93□□□□□ -1.3
RNF40O75150 RNU6-1059P-201ENST00000363752 98 ntBASIC6.93□□□□□ -1.3
RNF40O75150 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF40O75150 RNU6-842P-201ENST00000384269 107 ntBASIC6.93□□□□□ -1.3
RNF40O75150 RNU6-1060P-201ENST00000384664 107 ntBASIC6.93□□□□□ -1.3
RNF40O75150 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
RNF40O75150 AC097374.1-203ENST00000400783 485 ntBASIC6.93□□□□□ -1.3
RNF40O75150 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.93□□□□□ -1.3
RNF40O75150 RPLP0P7-201ENST00000416050 667 ntBASIC6.93□□□□□ -1.3
RNF40O75150 UBE2FP1-201ENST00000416536 447 ntBASIC6.93□□□□□ -1.3
RNF40O75150 RPL31P45-201ENST00000419532 356 ntBASIC6.93□□□□□ -1.3
RNF40O75150 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF40O75150 AL590233.1-201ENST00000430017 456 ntBASIC6.93□□□□□ -1.3
RNF40O75150 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF40O75150 AL645939.3-201ENST00000435408 225 ntBASIC6.93□□□□□ -1.3
RNF40O75150 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF40O75150 AC004383.1-201ENST00000438135 289 ntBASIC6.93□□□□□ -1.3
RNF40O75150 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF40O75150 PFN1P11-201ENST00000445829 389 ntBASIC6.93□□□□□ -1.3
RNF40O75150 AL355032.1-201ENST00000472981 438 ntBASIC6.93□□□□□ -1.3
RNF40O75150 AC068305.1-201ENST00000497406 726 ntBASIC6.93□□□□□ -1.3
RNF40O75150 AC104806.1-201ENST00000508720 308 ntBASIC6.93□□□□□ -1.3
RNF40O75150 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF40O75150 SNORA14.1-201ENST00000516113 141 ntBASIC6.93□□□□□ -1.3
RNF40O75150 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF40O75150 SOD1P3-201ENST00000518682 454 ntBASIC6.93□□□□□ -1.3
RNF40O75150 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.93□□□□□ -1.3
RNF40O75150 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF40O75150 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF40O75150 AL049779.2-201ENST00000553847 315 ntBASIC6.93□□□□□ -1.3
RNF40O75150 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF40O75150 AC012669.1-201ENST00000603209 283 ntBASIC6.93□□□□□ -1.3
RNF40O75150 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF40O75150 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF40O75150 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.93□□□□□ -1.3
RNF40O75150 AC111152.1-202ENST00000635848 339 ntBASIC6.93□□□□□ -1.3
RNF40O75150 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC6.93□□□□□ -1.3
RNF40O75150 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF40O75150 AC108751.5-201ENST00000492880 1336 ntBASIC6.93□□□□□ -1.3
RNF40O75150 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF40O75150 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF40O75150 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF40O75150 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF40O75150 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF40O75150 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF40O75150 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF40O75150 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF40O75150 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF40O75150 THAP12P4-201ENST00000528321 2266 ntBASIC6.92□□□□□ -1.3
RNF40O75150 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF40O75150 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF40O75150 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF40O75150 RNU6-97P-201ENST00000363387 104 ntBASIC6.92□□□□□ -1.3
RNF40O75150 RNU4-42P-201ENST00000364738 142 ntBASIC6.92□□□□□ -1.3
RNF40O75150 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF40O75150 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF40O75150 RNU6-378P-201ENST00000384324 107 ntBASIC6.92□□□□□ -1.3
RNF40O75150 RNU6-441P-201ENST00000384545 106 ntBASIC6.92□□□□□ -1.3
RNF40O75150 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RNF40O75150 RNA5SP474-201ENST00000391234 90 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms