Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 MTND5P7-201ENST00000413558 1798 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXA2O43364 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
HOXA2O43364 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXA2O43364 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
HOXA2O43364 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXA2O43364 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXA2O43364 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.74□□□□□ -1.33
HOXA2O43364 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
HOXA2O43364 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
HOXA2O43364 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 Y_RNA.210-201ENST00000364161 110 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HOXA2O43364 SNORA17A-201ENST00000391185 133 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 RN7SKP206-201ENST00000410823 293 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 MTATP6P29-201ENST00000415057 132 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXA2O43364 PGBD4P6-201ENST00000421501 610 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 DYNLT3P2-201ENST00000442517 295 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 VPS25P1-201ENST00000455691 508 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXA2O43364 AC011411.1-201ENST00000509592 876 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 AC108078.2-201ENST00000510750 236 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 AC021146.3-201ENST00000511911 260 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 SCARNA18.1-201ENST00000516330 83 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXA2O43364 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 AL137100.2-201ENST00000555786 315 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXA2O43364 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXA2O43364 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXA2O43364 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HOXA2O43364 AC011445.2-201ENST00000599274 173 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 AC097467.4-201ENST00000605504 141 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXA2O43364 MIR6729-201ENST00000618194 65 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 SNORA17.5-201ENST00000630429 132 ntBASIC6.74□□□□□ -1.33
HOXA2O43364 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXA2O43364 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXA2O43364 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
HOXA2O43364 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXA2O43364 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
HOXA2O43364 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HOXA2O43364 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXA2O43364 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXA2O43364 AC105235.1-201ENST00000623208 1816 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXA2O43364 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXA2O43364 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXA2O43364 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HOXA2O43364 AC093775.1-201ENST00000624154 1868 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXA2O43364 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HOXA2O43364 SNORD82-201ENST00000365530 70 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
HOXA2O43364 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXA2O43364 Y_RNA.461-201ENST00000384263 103 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXA2O43364 AC245096.1-201ENST00000413104 546 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 RPL35AP31-201ENST00000418340 337 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.73□□□□□ -1.33
HOXA2O43364 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 AC092162.1-201ENST00000432828 434 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXA2O43364 AC099799.1-201ENST00000439809 192 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.73□□□□□ -1.33
HOXA2O43364 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.73□□□□□ -1.33
HOXA2O43364 OR1H1P-201ENST00000448731 937 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 RNU6-1132P-201ENST00000459214 107 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 AC104472.2-201ENST00000469035 601 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 RPL23AP55-201ENST00000498163 452 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 AC009901.1-201ENST00000506703 541 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 TBCAP3-201ENST00000512475 312 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXA2O43364 SCARNA16.2-201ENST00000516520 172 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 RNU6-1092P-201ENST00000516955 87 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXA2O43364 AC090115.3-201ENST00000553218 849 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 HSBP1P1-201ENST00000555205 166 ntBASIC6.73□□□□□ -1.33
HOXA2O43364 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.73□□□□□ -1.33
HOXA2O43364 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.73□□□□□ -1.33
HOXA2O43364 MIR5692C1-201ENST00000585309 91 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms