Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 NACA3P-201ENST00000359690 648 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 SUGT1P1-201ENST00000379514 476 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 RNU6-906P-201ENST00000384700 70 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 MIR23B-201ENST00000384832 97 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 MIR554-201ENST00000384874 96 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AL161449.1-201ENST00000414531 1199 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 CYP4F29P-201ENST00000420685 446 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 MRPS36P1-201ENST00000421291 307 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 OR8F1P-201ENST00000425243 930 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 USP12PY-201ENST00000427677 1064 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 HLA-N-201ENST00000437516 135 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 RPS29P7-201ENST00000439662 171 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 RPL29P29-201ENST00000448725 423 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 RAD23BP3-201ENST00000454157 1152 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 PNPLA4P1-201ENST00000458328 305 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AL136126.1-201ENST00000473603 402 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC108734.3-201ENST00000481241 1165 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 VN1R105P-201ENST00000486595 910 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC012170.1-201ENST00000495139 359 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC092045.1-201ENST00000495716 1231 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC020593.1-201ENST00000507399 299 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 SLC25A15P5-201ENST00000508033 253 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 SAP18P1-201ENST00000512058 390 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 FTH1P21-201ENST00000512179 511 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 IGKV2D-36-201ENST00000518643 226 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 IGLVIV-53-201ENST00000520107 367 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 MTCO1P49-201ENST00000523429 802 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC023813.2-201ENST00000564321 469 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC138915.2-201ENST00000569776 97 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AL035411.2-201ENST00000604022 421 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC025588.3-201ENST00000604182 274 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AL031666.3-201ENST00000609320 1006 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC121761.2-201ENST00000617300 689 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 MARK2P15-201ENST00000432204 2186 ntBASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.73□□□□□ -1.81
NPIPA3F8WFD2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC116667.1-201ENST00000604855 2072 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 RNU6-413P-201ENST00000384115 107 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AL355379.1-201ENST00000405542 640 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AL023807.1-201ENST00000407932 359 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 RNU4-6P-201ENST00000410804 122 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AL356320.2-201ENST00000417263 507 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 RPL7P28-201ENST00000437739 740 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 Z95327.1-201ENST00000446082 482 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AL034418.1-201ENST00000448675 860 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC104073.1-201ENST00000451988 151 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 MTCO3P2-201ENST00000457365 171 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 RPL36AP13-201ENST00000457490 317 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 SNORD108-201ENST00000459332 71 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 RPL21P129-201ENST00000491732 478 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC110792.1-201ENST00000491826 472 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 RPL29P14-201ENST00000495837 428 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC017037.1-201ENST00000508460 471 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 RNU1-45P-201ENST00000517191 141 ntBASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.72□□□□□ -1.81
NPIPA3F8WFD2 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms