Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 TRIM51GP-201ENST00000534741 1350 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 LCOR-201ENST00000286067 4542 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 AL121768.1-201ENST00000613917 2544 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 RNA5SP335-201ENST00000363817 110 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 RNU4-66P-201ENST00000365199 138 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 RNA5SP30-201ENST00000365552 115 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 RNU4-20P-201ENST00000365601 151 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 RNU6-505P-201ENST00000384427 107 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 RNU6-606P-201ENST00000384721 111 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 CYB5AP4-201ENST00000396692 399 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 RNU4-14P-201ENST00000410858 122 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 AC116036.1-201ENST00000412199 367 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 PRPF38AP2-201ENST00000438179 851 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 AL049734.2-201ENST00000441066 616 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 AC093303.1-201ENST00000514549 295 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 RNU6-988P-201ENST00000519081 107 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 SUMO2P20-201ENST00000520803 283 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 AC063949.1-201ENST00000552900 865 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 SNRPGP18-201ENST00000553000 214 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 AC099494.2-201ENST00000623371 978 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 MTND4P1-201ENST00000457501 1466 ntBASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 RNU6-921P-201ENST00000384361 107 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AL356421.1-201ENST00000403255 413 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 U3.36-201ENST00000408418 213 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 RNU6-193P-201ENST00000410977 107 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 RPL36AP36-201ENST00000418616 301 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AC096632.1-201ENST00000427395 310 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AC137499.1-201ENST00000427602 88 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 USP9YP16-201ENST00000430287 407 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 USP24P1-201ENST00000433802 779 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AC023141.8-201ENST00000442554 208 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AC009963.2-201ENST00000453431 138 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 USP9YP23-201ENST00000455085 407 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 HMGB1P4-201ENST00000455362 567 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 GMFBP1-201ENST00000467831 427 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 RPL21P6-201ENST00000479171 504 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 PTP4A1P4-201ENST00000512479 322 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 OR5BN1P-201ENST00000532955 829 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AL163153.1-201ENST00000554223 283 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AC004817.2-201ENST00000561794 651 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 AC000068.2-201ENST00000608816 460 ntBASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZC3H4Q9UPT8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 AC092079.1-201ENST00000558620 1985 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 Y_RNA.197-201ENST00000364004 102 ntBASIC6.93□□□□□ -1.3
ZC3H4Q9UPT8 RPL7P60-201ENST00000397636 735 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms