Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 AL121612.2-201ENST00000612261 482 ntBASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 AC022467.1-201ENST00000614738 749 ntBASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 HMGB1P24-202ENST00000615653 685 ntBASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 MIR6826-201ENST00000617808 98 ntBASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 ANKRD26P2-201ENST00000445530 1710 ntBASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LIMD1Q9UGP4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AC112243.1-201ENST00000623949 3851 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 Y_RNA.428-201ENST00000384078 102 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 RNU4-70P-201ENST00000384579 139 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 MIR541-201ENST00000401360 84 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 RN7SKP159-201ENST00000410657 292 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 RPLP0P7-201ENST00000416050 667 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AC008267.5-201ENST00000424928 265 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 GAPDHP48-201ENST00000436626 961 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 HMGB1P12-201ENST00000438594 598 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 RN7SL643P-201ENST00000471845 291 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 RN7SL629P-201ENST00000489622 285 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AC108751.5-201ENST00000492880 1336 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AC022206.1-201ENST00000495947 347 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 RNU6-470P-201ENST00000515954 104 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 SETP7-201ENST00000552169 453 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AC005592.1-201ENST00000566527 1640 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AC004232.1-201ENST00000571388 208 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AC007114.2-201ENST00000576014 4281 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AL031320.1-201ENST00000604177 357 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AC018462.2-201ENST00000605375 395 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 DUSP12P1-201ENST00000612874 516 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 FAM157A-202ENST00000615155 405 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 AL118522.2-201ENST00000616045 615 ntBASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.63□□□□□ -1.35
LIMD1Q9UGP4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 AL158163.1-201ENST00000603915 1649 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 RNA5SP273-201ENST00000362484 113 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 RNU6-637P-201ENST00000384050 107 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 NDUFS5P1-201ENST00000405668 289 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 RN7SKP271-201ENST00000410528 320 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 RSL24D1P6-201ENST00000426934 401 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 CYCSP24-201ENST00000445119 316 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 VPS25P1-201ENST00000455691 508 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 RNU7-167P-201ENST00000459160 62 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 AC053481.1-201ENST00000467217 306 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 RN7SL369P-201ENST00000477138 299 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 RN7SL717P-201ENST00000478343 297 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 SNORA14.1-201ENST00000516113 141 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 RNU6-1069P-201ENST00000516612 133 ntBASIC6.62□□□□□ -1.35
LIMD1Q9UGP4 SNORD116.3-201ENST00000517176 78 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms