Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 SNRPGP3-201ENST00000469405 227 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AC015724.1-201ENST00000478577 156 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AC106707.2-201ENST00000484182 374 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 HMGN1P11-201ENST00000508668 303 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AC005351.1-201ENST00000511152 786 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 RN7SKP96-201ENST00000516948 297 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 NARSP2-201ENST00000518524 679 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AC023824.3-201ENST00000569003 562 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AC017100.2-201ENST00000584628 355 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 VN1R88P-201ENST00000596787 292 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 RNU1-30P-201ENST00000606575 163 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 ZNF849P-201ENST00000594711 1566 ntBASIC3.93□□□□□ -1.78
HPS4Q9NQG7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HPS4Q9NQG7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 XPOTP1-201ENST00000443317 2398 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 MTCO1P6-201ENST00000481192 1384 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 RNA5SP51-201ENST00000364750 119 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 RPS29P4-201ENST00000414733 161 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 FO393414.1-201ENST00000428697 1184 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC087650.1-201ENST00000431445 468 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 HSPD1P21-201ENST00000436541 245 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AL929288.2-201ENST00000446368 407 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 PRDX3P3-201ENST00000447765 522 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 RPL29P29-201ENST00000448725 423 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 BX248409.1-201ENST00000455497 255 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 HMGN1P15-201ENST00000513870 295 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 RNU2-58P-201ENST00000516403 183 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 RNU4-60P-201ENST00000517239 135 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 OR8I1P-201ENST00000529291 931 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC009101.1-201ENST00000568135 242 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC091488.1-201ENST00000604239 660 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AL359535.1-201ENST00000612100 1087 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC078880.5-201ENST00000617845 421 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 U6.105-201ENST00000637379 88 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.92□□□□□ -1.78
HPS4Q9NQG7 AC073055.1-201ENST00000456901 1621 ntBASIC3.92□□□□□ -1.78
HPS4Q9NQG7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC016716.1-201ENST00000265882 708 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 PTMAP5-201ENST00000393073 333 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 SOD2P1-201ENST00000396543 562 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 DNAJC19P6-201ENST00000401853 280 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 RNU2-21P-201ENST00000410368 188 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC246680.2-201ENST00000422106 389 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 RPL23AP15-201ENST00000450202 459 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC233982.1-201ENST00000451247 436 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 RPL37P6-202ENST00000464216 403 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC078785.3-201ENST00000476607 425 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 AC092902.1-201ENST00000486999 259 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HPS4Q9NQG7 RPL7P24-201ENST00000493052 752 ntBASIC3.91□□□□□ -1.78
HPS4Q9NQG7 RPL31P61-201ENST00000496160 376 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms