Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 COX6B1P3-201ENST00000312310 260 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC007685.1-201ENST00000329806 452 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 SNORA25.1-201ENST00000362326 128 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 CDC123-202ENST00000378900 933 ntTSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 Y_RNA.405-201ENST00000383979 100 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 Y_RNA.451-201ENST00000384200 100 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU6-514P-201ENST00000384208 107 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 Y_RNA.524-201ENST00000384564 100 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 Y_RNA.561-201ENST00000384694 100 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 MIR135A2-201ENST00000384854 100 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU6-1168P-201ENST00000390831 104 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU6-918P-201ENST00000391219 106 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 RPSAP42-201ENST00000403415 878 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AL133388.1-201ENST00000404509 287 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 MRPL32P1-201ENST00000406301 247 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 GNAI2P2-201ENST00000417003 916 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC090774.1-201ENST00000435925 246 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AL163193.1-201ENST00000444895 788 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AL356981.1-201ENST00000454879 684 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC022730.2-201ENST00000465359 452 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SL643P-201ENST00000471845 291 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 HIGD1AP3-201ENST00000515857 278 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU1-86P-201ENST00000516108 154 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SKP196-201ENST00000516267 345 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU1-107P-201ENST00000516617 154 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 IGHVIII-47-1-201ENST00000518187 331 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AL591767.3-201ENST00000554632 525 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC243312.1-201ENST00000570582 275 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC120057.2-201ENST00000571520 271 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 MIR4266-201ENST00000583300 55 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC008814.1-201ENST00000603797 406 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 SNORD113-5-201ENST00000607261 78 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC131009.3-201ENST00000621809 287 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 MIR6723-201ENST00000621981 89 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC016582.3-206ENST00000636547 207 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 AC009229.4-201ENST00000623854 1947 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 DDX10P2-201ENST00000417796 2614 ntBASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-1Q9BYR8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
KRTAP3-1Q9BYR8 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC3.59□□□□□ -1.84
KRTAP3-1Q9BYR8 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
KRTAP3-1Q9BYR8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.59□□□□□ -1.84
KRTAP3-1Q9BYR8 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
KRTAP3-1Q9BYR8 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AC139769.1-204ENST00000472297 1931 ntBASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-1Q9BYR8 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms