Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 MIR138-2-201ENST00000384916 84 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 MIR1298-201ENST00000408783 112 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 RNU4-65P-201ENST00000410473 140 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 RN7SKP268-201ENST00000411107 316 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 RNU6-130P-201ENST00000411112 103 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 RPS23P10-201ENST00000416185 486 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 MYL6P3-201ENST00000436904 432 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 RPEP5-201ENST00000441137 268 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 AC008264.1-201ENST00000447612 367 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 AC010655.1-201ENST00000449336 292 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 SNORA81.1-201ENST00000458922 177 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.24□□□□□ -1.41
USB1Q9BQ65 AC010631.1-201ENST00000474150 156 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.24□□□□□ -1.41
USB1Q9BQ65 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.24□□□□□ -1.41
USB1Q9BQ65 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.24□□□□□ -1.41
USB1Q9BQ65 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.24□□□□□ -1.41
USB1Q9BQ65 ACA59.1-201ENST00000515966 143 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.24□□□□□ -1.41
USB1Q9BQ65 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.24□□□□□ -1.41
USB1Q9BQ65 AC004584.2-201ENST00000570407 410 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 AC009955.2-201ENST00000597288 542 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 AL160281.1-201ENST00000605307 311 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.24□□□□□ -1.41
USB1Q9BQ65 AL731566.2-201ENST00000618971 317 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 AC129915.3-201ENST00000634128 948 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.24□□□□□ -1.41
USB1Q9BQ65 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 AC006116.1-201ENST00000587908 2171 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 AC123769.1-201ENST00000530992 3192 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.24□□□□□ -1.41
USB1Q9BQ65 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 AC140479.2-201ENST00000421567 3130 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 AC009120.2-204ENST00000621548 2032 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 Y_RNA.83-201ENST00000363005 113 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 SNORD51-201ENST00000384320 80 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 RNU6-1140P-201ENST00000410517 106 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AC096921.1-201ENST00000411661 375 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AL451074.5-201ENST00000415894 435 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 DNAJC19P7-201ENST00000428811 344 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AL121916.1-201ENST00000429405 308 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 RPL23AP25-201ENST00000430973 463 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 ATP5LP2-201ENST00000440646 311 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AC022431.1-201ENST00000450941 438 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AC007967.1-201ENST00000455422 1159 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 RN7SL492P-201ENST00000460700 295 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 RN7SL868P-201ENST00000485915 303 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 RPL30P11-201ENST00000495304 339 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 RPL10P7-201ENST00000495649 625 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 RNU6-911P-201ENST00000516523 104 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AC120036.3-201ENST00000517826 292 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 IGKV2-23-201ENST00000518729 323 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AC090151.1-201ENST00000520784 730 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AC107952.1-201ENST00000524200 376 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 DEFB108E-201ENST00000524692 240 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 MIR378H-201ENST00000579966 83 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 RNU6-85P-201ENST00000605989 107 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AC015819.1-201ENST00000613588 663 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 TUG1_2.1-201ENST00000614234 87 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 MIR6864-201ENST00000617935 70 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 AC073869.10-201ENST00000642016 354 ntBASIC6.23□□□□□ -1.41
USB1Q9BQ65 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
USB1Q9BQ65 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USB1Q9BQ65 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms