Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LITAFQ99732 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.24□□□□□ -1.89
LITAFQ99732 AC092121.1-201ENST00000569452 202 ntBASIC3.24□□□□□ -1.89
LITAFQ99732 AL391840.1-201ENST00000571144 367 ntBASIC3.24□□□□□ -1.89
LITAFQ99732 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.24□□□□□ -1.89
LITAFQ99732 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.24□□□□□ -1.89
LITAFQ99732 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.24□□□□□ -1.89
LITAFQ99732 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.24□□□□□ -1.89
LITAFQ99732 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LITAFQ99732 AC067959.1-201ENST00000604334 379 ntBASIC3.24□□□□□ -1.89
LITAFQ99732 MEMO1P5-201ENST00000604810 406 ntBASIC3.24□□□□□ -1.89
LITAFQ99732 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.24□□□□□ -1.89
LITAFQ99732 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.24□□□□□ -1.89
LITAFQ99732 AL008636.1-201ENST00000625038 1018 ntBASIC3.24□□□□□ -1.89
LITAFQ99732 PISRT1-201ENST00000626175 531 ntBASIC3.24□□□□□ -1.89
LITAFQ99732 MIR6863-201ENST00000636112 90 ntBASIC3.24□□□□□ -1.89
LITAFQ99732 FAM157B-203ENST00000639350 358 ntBASIC3.24□□□□□ -1.89
LITAFQ99732 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
LITAFQ99732 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LITAFQ99732 AL592148.3-201ENST00000608771 2646 ntBASIC3.24□□□□□ -1.89
LITAFQ99732 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LITAFQ99732 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.24□□□□□ -1.89
LITAFQ99732 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.24□□□□□ -1.89
LITAFQ99732 AL049780.3-201ENST00000624612 1583 ntBASIC3.24□□□□□ -1.89
LITAFQ99732 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
LITAFQ99732 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
LITAFQ99732 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LITAFQ99732 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LITAFQ99732 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LITAFQ99732 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LITAFQ99732 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
LITAFQ99732 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LITAFQ99732 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LITAFQ99732 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
LITAFQ99732 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.23□□□□□ -1.89
LITAFQ99732 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.23□□□□□ -1.89
LITAFQ99732 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LITAFQ99732 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LITAFQ99732 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.23□□□□□ -1.89
LITAFQ99732 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LITAFQ99732 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.23□□□□□ -1.89
LITAFQ99732 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LITAFQ99732 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LITAFQ99732 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.23□□□□□ -1.89
LITAFQ99732 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.23□□□□□ -1.89
LITAFQ99732 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LITAFQ99732 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LITAFQ99732 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LITAFQ99732 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LITAFQ99732 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
LITAFQ99732 Y_RNA.256-201ENST00000364594 104 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 RNU1-43P-201ENST00000365052 165 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.23□□□□□ -1.89
LITAFQ99732 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.23□□□□□ -1.89
LITAFQ99732 CIR1P3-201ENST00000405137 479 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 FCF1P10-201ENST00000407590 479 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 RNU6-195P-201ENST00000411352 109 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.23□□□□□ -1.89
LITAFQ99732 AC245052.5-201ENST00000416320 649 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 NUP35P2-201ENST00000416748 943 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 RPL30P16-201ENST00000419341 429 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC3.23□□□□□ -1.89
LITAFQ99732 RPL7P57-201ENST00000423238 740 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 USP9YP36-201ENST00000424581 829 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LITAFQ99732 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.23□□□□□ -1.89
LITAFQ99732 AL358934.1-201ENST00000432346 324 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 MTND4LP10-201ENST00000435146 291 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.23□□□□□ -1.89
LITAFQ99732 AL451074.3-201ENST00000437709 472 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.23□□□□□ -1.89
LITAFQ99732 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.23□□□□□ -1.89
LITAFQ99732 AC069285.2-201ENST00000440210 275 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AC011753.3-201ENST00000443436 406 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 MTATP6P30-201ENST00000443540 664 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 RPL17P49-201ENST00000443728 411 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.23□□□□□ -1.89
LITAFQ99732 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.23□□□□□ -1.89
LITAFQ99732 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LITAFQ99732 AP006222.1-205ENST00000450734 457 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.23□□□□□ -1.89
LITAFQ99732 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LITAFQ99732 AC013267.1-201ENST00000458227 267 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 PPIAP21-201ENST00000464473 501 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 PLGLA-201ENST00000465668 449 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AL672167.3-201ENST00000465951 960 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AC013356.1-201ENST00000489027 564 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AP001025.2-201ENST00000490908 477 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.23□□□□□ -1.89
LITAFQ99732 KCTD9P5-201ENST00000504141 1170 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AC006390.1-201ENST00000508068 283 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.23□□□□□ -1.89
LITAFQ99732 AC110792.2-201ENST00000510278 224 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 PTGES3P3-201ENST00000511479 482 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.23□□□□□ -1.89
LITAFQ99732 HSD3BP3-201ENST00000514706 994 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 RNA5SP446-201ENST00000515955 82 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AC090151.1-201ENST00000520784 730 ntBASIC3.23□□□□□ -1.89
LITAFQ99732 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.23□□□□□ -1.89
LITAFQ99732 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms