Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC111193.1-201ENST00000504097 155 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC134698.5-201ENST00000519444 336 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC090151.1-201ENST00000520784 730 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC100770.1-201ENST00000532310 322 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 CYCSP29-201ENST00000533731 318 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 OR6C7P-201ENST00000547875 934 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC055764.2-201ENST00000610089 670 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC068137.3-201ENST00000639191 341 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AC073869.6-201ENST00000640656 341 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 AL353743.4-201ENST00000422653 1547 ntBASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ZNF548Q8NEK5 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC008033.1-201ENST00000216407 1162 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 Y_RNA.41-201ENST00000362646 102 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 Y_RNA.359-201ENST00000365498 102 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 RN7SKP263-201ENST00000411194 309 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 RPS15AP38-201ENST00000413110 372 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 RPL23AP39-201ENST00000415533 405 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 CYCSP46-201ENST00000423569 204 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AL050321.1-201ENST00000432363 400 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 USP9YP29-201ENST00000445112 563 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 DHFRP3-201ENST00000455595 559 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC005229.2-201ENST00000456995 399 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 MTND1P16-201ENST00000465177 898 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 UQCRHP4-201ENST00000471686 272 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC116337.2-201ENST00000477662 156 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC005912.1-201ENST00000495392 255 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 ATP1B1P1-201ENST00000509767 915 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 SNORA31.9-201ENST00000516429 84 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 RNU6-1178P-201ENST00000516674 107 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 MTND4LP26-201ENST00000518144 282 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 OR7K1P-201ENST00000546439 926 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 POLR2KP1-201ENST00000553226 168 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 BNIP3P5-201ENST00000562290 498 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC007224.1-201ENST00000564410 144 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AL512347.1-201ENST00000566420 503 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 VN1R92P-201ENST00000598511 928 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AL390838.2-201ENST00000602394 274 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AL513477.2-201ENST00000607858 568 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 MIR7973-1-201ENST00000614683 76 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC069209.1-201ENST00000619282 651 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 MIR7154-201ENST00000620673 73 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC073348.1-201ENST00000623002 331 ntBASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.38□□□□□ -1.71
ZNF548Q8NEK5 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ZNF548Q8NEK5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.37□□□□□ -1.71
ZNF548Q8NEK5 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.37□□□□□ -1.71
ZNF548Q8NEK5 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF548Q8NEK5 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZNF548Q8NEK5 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ZNF548Q8NEK5 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
ZNF548Q8NEK5 AC010329.2-201ENST00000595195 2737 ntBASIC4.37□□□□□ -1.71
ZNF548Q8NEK5 RNA5SP28-201ENST00000363841 119 ntBASIC4.37□□□□□ -1.71
ZNF548Q8NEK5 RNU4-91P-201ENST00000364778 135 ntBASIC4.37□□□□□ -1.71
ZNF548Q8NEK5 RNA5SP366-201ENST00000365454 123 ntBASIC4.37□□□□□ -1.71
ZNF548Q8NEK5 SNORA75-201ENST00000384158 137 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms