Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL034374.1-201ENST00000406329 351 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 RPL23AP47-201ENST00000408017 460 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 MIR1284-201ENST00000408337 120 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 RPL36AP36-201ENST00000418616 301 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 RPL34P6-201ENST00000432390 345 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 RPL21P110-201ENST00000433345 446 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC000111.3-201ENST00000433478 193 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AL121769.1-201ENST00000469473 401 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 MTND6P6-201ENST00000478031 263 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC105137.1-201ENST00000484355 562 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 RN7SL604P-201ENST00000492589 296 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 SETP14-201ENST00000497538 873 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 RN7SKP298-201ENST00000515950 94 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 MRPL49P2-201ENST00000521066 465 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 PCMTD1P2-201ENST00000565017 355 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 IPO5P1-202ENST00000600039 287 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AL022154.1-201ENST00000604698 785 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC090970.3-201ENST00000612566 866 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC007014.2-201ENST00000615581 479 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC104985.2-201ENST00000620598 500 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 MKKS-204ENST00000639674 192 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AP001642.1-201ENST00000624727 2117 ntBASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A3Q8N4M1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC027228.2-201ENST00000567141 2154 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC004817.4-201ENST00000602396 3625 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC107021.2-201ENST00000567714 2095 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 RNU6-797P-201ENST00000363101 109 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 RNU6-501P-201ENST00000364072 100 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 RNA5SP88-201ENST00000365560 109 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 SUGT1P1-201ENST00000379514 476 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 MIR137-201ENST00000385223 102 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AL590762.2-201ENST00000395798 571 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 MIR1303-201ENST00000408625 86 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 RNU6-248P-201ENST00000410720 107 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 USP9YP6-201ENST00000413550 854 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 CCDC58P2-201ENST00000417131 366 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 RPL7P57-201ENST00000423238 740 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 SKP1P3-201ENST00000429280 487 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 PAXBP1P1-201ENST00000449315 447 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC098824.1-201ENST00000453565 980 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 USP9YP34-201ENST00000453983 808 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 RPL7AP52-201ENST00000458096 790 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 SNORA84-201ENST00000459229 133 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 RPL31P58-201ENST00000469001 379 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 RPL9P6-201ENST00000492764 598 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC023424.2-201ENST00000493479 777 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC020593.1-201ENST00000507399 299 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 RPL7L1P13-201ENST00000511702 739 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC074344.1-201ENST00000512823 224 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC116347.2-201ENST00000514912 523 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 OR4R3P-201ENST00000525084 838 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms