Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
NUDCD3Q8IVD9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 NSRP1P1-201ENST00000444067 1693 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 RNU6-1339P-201ENST00000363574 91 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AL445183.3-201ENST00000414168 502 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AL121882.1-201ENST00000422893 417 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AL117339.2-201ENST00000430475 180 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AL512661.1-201ENST00000434586 1253 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 HMGB1P45-201ENST00000435986 653 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 FABP5P3-201ENST00000437960 408 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 RPL23AP33-201ENST00000442301 452 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 RPL23AP15-201ENST00000450202 459 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AC007967.1-201ENST00000455422 1159 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 HMGN1P18-201ENST00000457642 277 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 RPL23AP67-201ENST00000465341 474 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 TPT1P3-201ENST00000492841 512 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AL139099.1-201ENST00000497398 403 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AC093755.1-201ENST00000512950 1023 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AC108064.1-201ENST00000513791 460 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 MED28P5-201ENST00000528254 438 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 CENPUP2-201ENST00000555897 1186 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 ATP5F1P7-201ENST00000567330 760 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AC087499.8-201ENST00000578406 226 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 HMGN2P28-201ENST00000606102 262 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AL450489.1-201ENST00000612071 468 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AC083809.1-201ENST00000615051 472 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AC092608.3-201ENST00000625017 386 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AC091152.2-201ENST00000591628 2569 ntBASIC3.47□□□□□ -1.85
NUDCD3Q8IVD9 AC092326.2-201ENST00000624772 1561 ntBASIC3.46□□□□□ -1.85
NUDCD3Q8IVD9 ZNF542P-204ENST00000482727 1305 ntBASIC3.46□□□□□ -1.85
NUDCD3Q8IVD9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 SPRR2C-201ENST00000290702 219 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 SNORD56.4-201ENST00000363883 71 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 RN7SKP53-201ENST00000411337 315 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AL158050.1-201ENST00000416077 457 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 MTND2P16-201ENST00000419987 799 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 RPL23AP82-202ENST00000427528 469 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 CKS1BP5-201ENST00000434172 273 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 YWHAZP8-201ENST00000436935 731 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC004865.1-201ENST00000442276 1003 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 HMGB3P8-201ENST00000449709 577 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC008280.2-201ENST00000455473 307 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 CENPBD1P1-201ENST00000464061 469 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 RN7SL385P-201ENST00000468873 276 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC008885.2-201ENST00000509506 930 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 MIR2116-201ENST00000517221 80 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC107934.2-201ENST00000518653 310 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC074029.1-201ENST00000552531 1044 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC079148.1-201ENST00000565944 819 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AL590392.1-201ENST00000604960 446 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC096586.1-201ENST00000610267 561 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AL354798.1-201ENST00000622505 329 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 FAM157B-203ENST00000639350 358 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC007823.1-201ENST00000569932 1566 ntBASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NUDCD3Q8IVD9 AC008432.1-201ENST00000615912 1320 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC046144.1-201ENST00000478559 1853 ntBASIC3.45□□□□□ -1.86
NUDCD3Q8IVD9 AC021755.1-201ENST00000559747 1447 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms