Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 U6.107-201ENST00000637108 79 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 MIR7153-201ENST00000637758 57 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC132825.7-201ENST00000638744 335 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CTR9Q6PD62 MTND4P9-201ENST00000507819 1346 ntBASIC4.35□□□□□ -1.71
CTR9Q6PD62 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTR9Q6PD62 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTR9Q6PD62 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTR9Q6PD62 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTR9Q6PD62 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 RNA5SP27-201ENST00000363839 119 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 RNA5SP167-201ENST00000365461 116 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 RN7SKP285-201ENST00000410137 318 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC069218.2-201ENST00000411665 344 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 DEFB130D-201ENST00000426866 237 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC093422.3-201ENST00000428506 305 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 HSPD1P21-201ENST00000436541 245 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 AL096803.2-201ENST00000450032 677 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC078785.3-201ENST00000476607 425 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC010374.2-201ENST00000512933 535 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 RANP9-201ENST00000519957 271 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC074050.1-201ENST00000563247 211 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC023825.1-201ENST00000566704 1030 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC126365.2-201ENST00000580630 379 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC020914.6-201ENST00000594327 272 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC007687.1-201ENST00000602704 304 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AL450489.1-201ENST00000612071 468 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 RNVU1-4-201ENST00000612985 164 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC073569.3-201ENST00000619055 682 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 AC015726.3-201ENST00000624501 418 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 SEPT7P7-201ENST00000420492 1301 ntBASIC4.34□□□□□ -1.71
CTR9Q6PD62 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.34□□□□□ -1.71
CTR9Q6PD62 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTR9Q6PD62 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTR9Q6PD62 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTR9Q6PD62 HSPA8P19-201ENST00000505359 1517 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTR9Q6PD62 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 RNU6-317P-201ENST00000384031 107 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 ATP5F1P4-201ENST00000397288 746 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTR9Q6PD62 AIMP1P1-201ENST00000418670 937 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 AL354692.1-201ENST00000423044 315 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 HMGN2P31-201ENST00000432430 273 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 CBX1P4-201ENST00000439415 457 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTR9Q6PD62 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 SNORD108-201ENST00000459332 71 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 TMED11P-201ENST00000479478 690 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 AC092451.1-201ENST00000480211 153 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 AC004069.2-201ENST00000505438 1114 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 RN7SKP13-201ENST00000515933 244 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 AC093331.1-201ENST00000521474 169 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 IGKV2D-19-201ENST00000523346 262 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 AL121766.1-201ENST00000547436 487 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 AC023161.2-201ENST00000551218 780 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 AF129408.1-201ENST00000608767 431 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 AC139769.3-201ENST00000618383 175 ntBASIC4.33□□□□□ -1.72
CTR9Q6PD62 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTR9Q6PD62 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTR9Q6PD62 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.33□□□□□ -1.72
CTR9Q6PD62 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CTR9Q6PD62 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTR9Q6PD62 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTR9Q6PD62 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
CTR9Q6PD62 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.32□□□□□ -1.72
CTR9Q6PD62 ZNF542P-204ENST00000482727 1305 ntBASIC4.32□□□□□ -1.72
CTR9Q6PD62 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTR9Q6PD62 MIR620-201ENST00000385232 95 ntBASIC4.32□□□□□ -1.72
CTR9Q6PD62 AL355615.1-201ENST00000406187 641 ntBASIC4.32□□□□□ -1.72
CTR9Q6PD62 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.32□□□□□ -1.72
CTR9Q6PD62 HMGB3P20-201ENST00000417997 600 ntBASIC4.32□□□□□ -1.72
CTR9Q6PD62 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms