Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 AP001148.1-201ENST00000624124 2359 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 RNA5SP65-201ENST00000363166 119 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 RNU6-97P-201ENST00000363387 104 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 Y_RNA.143-201ENST00000363520 106 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 RN7SKP237-201ENST00000364663 301 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 MIR569-201ENST00000385228 96 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 SNORA40-201ENST00000388090 126 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 AL022722.2-201ENST00000402519 180 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 AL033519.2-201ENST00000403958 392 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
VARS2Q5ST30 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.11□□□□□ -1.27
VARS2Q5ST30 RPS12P5-201ENST00000423449 371 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 MTCO1P39-201ENST00000426148 480 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC7.11□□□□□ -1.27
VARS2Q5ST30 MTCO1P5-201ENST00000433573 344 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 DAP3P1-201ENST00000441522 278 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 CRYGGP-201ENST00000443337 145 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 AC097359.1-201ENST00000447946 463 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC7.11□□□□□ -1.27
VARS2Q5ST30 RBBP4P6-201ENST00000508098 202 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 AC109481.1-201ENST00000509173 282 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 AC074250.1-201ENST00000511117 192 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 COX6B1P6-201ENST00000522347 255 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 AP004609.2-201ENST00000532177 190 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 SYF2P1-201ENST00000550658 413 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 SNORA70D-201ENST00000578836 135 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 AC008962.1-201ENST00000605729 304 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 AL161616.1-201ENST00000611867 286 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.11□□□□□ -1.27
VARS2Q5ST30 AC034229.6-201ENST00000623704 224 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.11□□□□□ -1.27
VARS2Q5ST30 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
VARS2Q5ST30 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
VARS2Q5ST30 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 CDC27P2-201ENST00000425026 1922 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 AC123769.2-201ENST00000624332 5984 ntBASIC7.11□□□□□ -1.27
VARS2Q5ST30 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
VARS2Q5ST30 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.11□□□□□ -1.27
VARS2Q5ST30 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VARS2Q5ST30 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VARS2Q5ST30 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VARS2Q5ST30 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VARS2Q5ST30 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VARS2Q5ST30 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VARS2Q5ST30 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
VARS2Q5ST30 Y_RNA.234-201ENST00000364409 97 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 RNU6-102P-201ENST00000384485 104 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 RNU6-278P-201ENST00000390945 109 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 RNU2-6P-201ENST00000411404 190 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 MRPS21P5-201ENST00000417885 231 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC007098.1-201ENST00000420122 367 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 DUTP4-201ENST00000424782 475 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC016696.1-201ENST00000446949 318 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC005077.1-201ENST00000449226 375 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 AL137159.1-201ENST00000452808 512 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 HMGN3P1-201ENST00000453847 193 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC021382.1-201ENST00000483523 359 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC018437.1-201ENST00000492214 406 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 OR7H2P-201ENST00000513483 306 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 SNORD116-25-201ENST00000516517 92 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC084121.1-201ENST00000533882 835 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 AL591767.3-201ENST00000554632 525 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC091768.1-201ENST00000609258 930 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC073488.9-201ENST00000631601 754 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC073488.6-201ENST00000632293 754 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 AC111152.1-202ENST00000635848 339 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 IGHVIII-44-202ENST00000636235 289 ntBASIC7.1□□□□□ -1.27
VARS2Q5ST30 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms