Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 MTND3P24-201ENST00000506306 329 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 AC104619.4-201ENST00000510773 249 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 OSBPL9P3-201ENST00000534523 595 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 ZNF192P1-203ENST00000565888 810 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 AC020914.6-201ENST00000594327 272 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 AL392112.1-201ENST00000605115 829 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 AL034408.1-202ENST00000636088 415 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCS1Q01581 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AP001148.1-201ENST00000624124 2359 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 RNU6-356P-201ENST00000384140 107 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 SNORA70E-201ENST00000384492 135 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 MIR200C-201ENST00000384980 68 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 ATP5F1P3-201ENST00000397213 657 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 ATF1P1-201ENST00000406040 927 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 PTGES3P2-201ENST00000407942 482 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 RN7SKP27-201ENST00000410684 333 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 Z99755.1-201ENST00000414048 380 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 PNRC2P1-201ENST00000423940 420 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC005189.1-201ENST00000431286 310 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 RPL7P29-201ENST00000437151 728 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC239367.2-201ENST00000447309 705 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC073387.1-201ENST00000453261 709 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC096992.1-201ENST00000459808 709 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC091564.1-201ENST00000464563 479 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 RPL7L1P8-201ENST00000469911 741 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC104687.1-201ENST00000485829 412 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AP002812.1-201ENST00000495378 474 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 PTGES3P3-201ENST00000511479 482 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC107934.2-201ENST00000518653 310 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 IGKV2-23-201ENST00000518729 323 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 HMGB1P23-201ENST00000518743 568 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC026403.1-201ENST00000518938 295 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 POLR2KP1-201ENST00000553226 168 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC079148.1-201ENST00000565944 819 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 MIR1254-2-201ENST00000579553 63 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AL391261.4-201ENST00000616012 481 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 U6.48-201ENST00000618523 106 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC110801.1-201ENST00000623590 212 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 PRO1804-201ENST00000623780 2050 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HMGCS1Q01581 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC119744.1-201ENST00000454746 1715 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AL645937.1-201ENST00000641739 1652 ntBASIC3.3□□□□□ -1.88
HMGCS1Q01581 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS1Q01581 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HMGCS1Q01581 MTND5P11-201ENST00000511037 1812 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 MIR1303-201ENST00000408625 86 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC126124.2-201ENST00000413542 321 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 VTA1P1-201ENST00000414044 866 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 AL356968.1-201ENST00000416622 474 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HMGCS1Q01581 AL121882.1-201ENST00000422893 417 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 VN1R42P-201ENST00000424651 344 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 RPL23AP82-202ENST00000427528 469 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 USP9YP31-201ENST00000431405 881 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms