Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NKX6-1P78426 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX6-1P78426 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
NKX6-1P78426 AP001642.1-201ENST00000624727 2117 ntBASIC4.6□□□□□ -1.67
NKX6-1P78426 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX6-1P78426 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX6-1P78426 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 RNA5SP258-201ENST00000362750 119 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 RNU6-97P-201ENST00000363387 104 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NKX6-1P78426 FCF1P10-201ENST00000407590 479 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 RNU6-248P-201ENST00000410720 107 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.59□□□□□ -1.67
NKX6-1P78426 BX890604.2-201ENST00000427883 474 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 AL022238.1-201ENST00000442557 355 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX6-1P78426 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 AL359893.1-201ENST00000447628 1580 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 TCEA1P1-201ENST00000449716 880 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX6-1P78426 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX6-1P78426 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NKX6-1P78426 AP1S2P1-201ENST00000457344 379 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 RPS4XP10-201ENST00000465034 731 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NKX6-1P78426 TMED11P-201ENST00000479478 690 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 AC058823.1-201ENST00000485315 474 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.59□□□□□ -1.67
NKX6-1P78426 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX6-1P78426 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 MTND2P33-201ENST00000506452 1031 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 AC004980.4-201ENST00000513375 203 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX6-1P78426 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.59□□□□□ -1.67
NKX6-1P78426 OR8L1P-201ENST00000534005 955 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX6-1P78426 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX6-1P78426 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NKX6-1P78426 RPL21P5-201ENST00000554662 472 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 EDDM3DP-201ENST00000554692 434 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 AL390334.1-201ENST00000556395 450 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX6-1P78426 AC009063.1-201ENST00000563342 702 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.59□□□□□ -1.67
NKX6-1P78426 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX6-1P78426 AP003465.2-201ENST00000602571 373 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 AC105429.2-201ENST00000610567 517 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.59□□□□□ -1.67
NKX6-1P78426 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 AC091834.1-201ENST00000614543 472 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NKX6-1P78426 AC072046.2-201ENST00000618366 268 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 AC099494.2-201ENST00000623371 978 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 AP003400.3-201ENST00000624904 346 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX6-1P78426 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.59□□□□□ -1.67
NKX6-1P78426 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NKX6-1P78426 AC017104.4-201ENST00000636283 1592 ntBASIC4.59□□□□□ -1.67
NKX6-1P78426 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 AC026951.1-201ENST00000559530 2459 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AL731566.1-201ENST00000620490 1937 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX6-1P78426 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NKX6-1P78426 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 RNA5SP123-201ENST00000363244 119 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX6-1P78426 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 AC019155.1-201ENST00000382242 574 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 RNU6-339P-201ENST00000384310 107 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 Y_RNA.582-201ENST00000391023 95 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AC013442.1-201ENST00000397347 228 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 FCF1P9-201ENST00000412546 282 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.58□□□□□ -1.68
NKX6-1P78426 SPA17P1-201ENST00000416656 452 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 MTCYBP45-201ENST00000435243 565 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NKX6-1P78426 RABEPKP1-201ENST00000440529 1026 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AC104634.1-201ENST00000452720 462 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms