Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC044913.1-201ENST00000557200 430 ntBASIC4.25□□□□□ -1.73
MTHFRP42898 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.25□□□□□ -1.73
MTHFRP42898 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.25□□□□□ -1.73
MTHFRP42898 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
MTHFRP42898 CYCSP41-201ENST00000616920 296 ntBASIC4.25□□□□□ -1.73
MTHFRP42898 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.25□□□□□ -1.73
MTHFRP42898 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.25□□□□□ -1.73
MTHFRP42898 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.25□□□□□ -1.73
MTHFRP42898 AL034408.1-202ENST00000636088 415 ntBASIC4.25□□□□□ -1.73
MTHFRP42898 AC138649.5-201ENST00000637456 137 ntBASIC4.25□□□□□ -1.73
MTHFRP42898 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.25□□□□□ -1.73
MTHFRP42898 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MTHFRP42898 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
MTHFRP42898 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
MTHFRP42898 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.25□□□□□ -1.73
MTHFRP42898 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MTHFRP42898 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
MTHFRP42898 MTND4P8-201ENST00000514997 1362 ntBASIC4.25□□□□□ -1.73
MTHFRP42898 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MTHFRP42898 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.25□□□□□ -1.73
MTHFRP42898 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MTHFRP42898 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
MTHFRP42898 ZNF285B-201ENST00000561698 1767 ntBASIC4.25□□□□□ -1.73
MTHFRP42898 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.24□□□□□ -1.73
MTHFRP42898 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MTHFRP42898 AC024560.2-201ENST00000507981 1497 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MTHFRP42898 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
MTHFRP42898 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.24□□□□□ -1.73
MTHFRP42898 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.24□□□□□ -1.73
MTHFRP42898 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
MTHFRP42898 RNU1-15P-201ENST00000353977 144 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.24□□□□□ -1.73
MTHFRP42898 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
MTHFRP42898 MIR34B-201ENST00000385076 84 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AC091390.3-201ENST00000426478 338 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.24□□□□□ -1.73
MTHFRP42898 PSMA2P3-201ENST00000429685 675 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AC091286.1-201ENST00000431233 461 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 GTF2IP3-201ENST00000433887 494 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 YWHAZP8-201ENST00000436935 731 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 Z77249.1-201ENST00000444622 1175 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.24□□□□□ -1.73
MTHFRP42898 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
MTHFRP42898 NPM1P13-201ENST00000452663 865 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 RPL36AP13-201ENST00000457490 317 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AP000893.1-201ENST00000474462 794 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MTHFRP42898 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MTHFRP42898 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MTHFRP42898 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MTHFRP42898 PTGES3P3-201ENST00000511479 482 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.24□□□□□ -1.73
MTHFRP42898 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MTHFRP42898 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.24□□□□□ -1.73
MTHFRP42898 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.24□□□□□ -1.73
MTHFRP42898 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.24□□□□□ -1.73
MTHFRP42898 HIGD1AP6-201ENST00000521833 279 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.24□□□□□ -1.73
MTHFRP42898 MTCO3P15-201ENST00000526563 574 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AP000889.1-201ENST00000530968 660 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.24□□□□□ -1.73
MTHFRP42898 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.24□□□□□ -1.73
MTHFRP42898 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.24□□□□□ -1.73
MTHFRP42898 CYP4A43P-201ENST00000568156 121 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AC025627.2-201ENST00000576220 160 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 MIR4509-3-201ENST00000578671 94 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.24□□□□□ -1.73
MTHFRP42898 MIR4509-2-201ENST00000583920 94 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AC068790.5-201ENST00000602741 355 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.24□□□□□ -1.73
MTHFRP42898 AL365400.2-201ENST00000605604 902 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AC024060.1-201ENST00000607052 494 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AL391497.1-201ENST00000608671 547 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AC012531.5-201ENST00000611375 151 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 PART1_2.1-201ENST00000612397 250 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 MIR4509-1-201ENST00000618224 94 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 FP236240.3-201ENST00000623061 327 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 AC019278.1-201ENST00000623516 479 ntBASIC4.24□□□□□ -1.73
MTHFRP42898 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.24□□□□□ -1.73
MTHFRP42898 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
MTHFRP42898 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
MTHFRP42898 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.24□□□□□ -1.73
MTHFRP42898 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MTHFRP42898 AC105074.1-201ENST00000623380 3095 ntBASIC4.23□□□□□ -1.73
MTHFRP42898 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
MTHFRP42898 AP000568.1-201ENST00000282964 442 ntBASIC4.23□□□□□ -1.73
MTHFRP42898 SNORD6-201ENST00000365444 73 ntBASIC4.23□□□□□ -1.73
MTHFRP42898 RHOT1P2-201ENST00000366423 333 ntBASIC4.23□□□□□ -1.73
MTHFRP42898 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MTHFRP42898 RNU6-224P-201ENST00000384055 107 ntBASIC4.23□□□□□ -1.73
MTHFRP42898 SNORA5A-201ENST00000384111 134 ntBASIC4.23□□□□□ -1.73
MTHFRP42898 MIR93-201ENST00000385024 80 ntBASIC4.23□□□□□ -1.73
MTHFRP42898 MIR513A2-201ENST00000385249 127 ntBASIC4.23□□□□□ -1.73
MTHFRP42898 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
MTHFRP42898 GSTA8P-201ENST00000404253 637 ntBASIC4.23□□□□□ -1.73
MTHFRP42898 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.23□□□□□ -1.73
MTHFRP42898 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.23□□□□□ -1.73
MTHFRP42898 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.23□□□□□ -1.73
MTHFRP42898 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms