Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HOXC12P31275 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HOXC12P31275 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HOXC12P31275 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC12P31275 AC108467.2-201ENST00000617640 1597 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC12P31275 AC062029.1-202ENST00000606164 3651 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 RNA5SP46-201ENST00000362370 120 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 RNU6-223P-201ENST00000362830 107 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 SNORA70-201ENST00000384436 135 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HOXC12P31275 RNU6-1158P-201ENST00000391167 107 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC12P31275 RPL7P60-201ENST00000397636 735 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 RNA5SP118-201ENST00000410385 109 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 DPPA2P3-201ENST00000411853 655 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.13□□□□□ -1.59
HOXC12P31275 RPSAP35-201ENST00000413753 818 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 AC069213.2-201ENST00000420238 366 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 RGS17P1-201ENST00000423358 553 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 EIF1P3-201ENST00000423841 334 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 VTI1BP4-201ENST00000427516 527 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXC12P31275 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC12P31275 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXC12P31275 RPS15AP9-201ENST00000439856 381 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 SPRYD7P1-201ENST00000443861 570 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC12P31275 RNU6-261P-201ENST00000459506 102 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXC12P31275 SIAH1P1-201ENST00000479411 923 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 AC022215.1-201ENST00000481770 362 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 NIP7P2-201ENST00000485801 544 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 RPL39P36-201ENST00000490784 156 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 AL035690.1-201ENST00000490892 383 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXC12P31275 NENFP3-201ENST00000503735 313 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXC12P31275 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC12P31275 AC108043.1-201ENST00000512696 574 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC12P31275 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXC12P31275 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXC12P31275 PDCD5P1-201ENST00000543528 309 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC12P31275 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC12P31275 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC12P31275 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXC12P31275 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.13□□□□□ -1.59
HOXC12P31275 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC12P31275 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.13□□□□□ -1.59
HOXC12P31275 AL390726.5-202ENST00000564800 256 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC12P31275 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.13□□□□□ -1.59
HOXC12P31275 MIR1269B-201ENST00000580405 75 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 AC098848.2-201ENST00000588023 330 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 KC877982.1-201ENST00000602313 470 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXC12P31275 OR6R2P-201ENST00000609216 300 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXC12P31275 AC007742.2-201ENST00000618226 398 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC12P31275 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
HOXC12P31275 AC007529.1-201ENST00000418574 2178 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 AP004607.3-201ENST00000530354 3915 ntBASIC5.13□□□□□ -1.59
HOXC12P31275 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXC12P31275 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HOXC12P31275 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXC12P31275 AC022164.1-201ENST00000568767 2673 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 AC009902.3-201ENST00000606235 2172 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC12P31275 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC12P31275 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC12P31275 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC12P31275 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC12P31275 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HOXC12P31275 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC12P31275 SNORA64.1-201ENST00000362600 132 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 RNU4-76P-201ENST00000364509 141 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 RNU6-359P-201ENST00000365466 108 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 RNU6-146P-201ENST00000384602 108 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 MIR1-2-201ENST00000384961 85 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC12P31275 RPL11P3-201ENST00000395256 523 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HOXC12P31275 RSU1P3-201ENST00000412878 835 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 BMS1P17-202ENST00000416720 316 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC12P31275 AC016691.1-201ENST00000441321 413 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC12P31275 AC104651.2-201ENST00000447549 528 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC12P31275 AC104308.1-201ENST00000454621 333 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC12P31275 TRBV5-2-201ENST00000489095 273 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC12P31275 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC12P31275 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC12P31275 AC010486.1-201ENST00000511793 424 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms