Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 RBMY1HP-201ENST00000382759 1389 ntBASIC6.44□□□□□ -1.38
RFX1P22670 MTND4P35-201ENST00000604257 1375 ntBASIC6.44□□□□□ -1.38
RFX1P22670 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RFX1P22670 AL161756.3-201ENST00000641216 2071 ntBASIC6.43□□□□□ -1.38
RFX1P22670 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.43□□□□□ -1.38
RFX1P22670 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.43□□□□□ -1.38
RFX1P22670 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
RFX1P22670 RNU6-511P-201ENST00000363496 107 ntBASIC6.43□□□□□ -1.38
RFX1P22670 SNORA32.2-201ENST00000384049 122 ntBASIC6.43□□□□□ -1.38
RFX1P22670 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
RFX1P22670 MIR937-201ENST00000401271 86 ntBASIC6.43□□□□□ -1.38
RFX1P22670 RNU6-1148P-201ENST00000410992 104 ntBASIC6.43□□□□□ -1.38
RFX1P22670 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.43□□□□□ -1.38
RFX1P22670 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC6.43□□□□□ -1.38
RFX1P22670 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.43□□□□□ -1.38
RFX1P22670 BX510359.3-201ENST00000422168 306 ntBASIC6.43□□□□□ -1.38
RFX1P22670 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.43□□□□□ -1.38
RFX1P22670 RPL34P6-201ENST00000432390 345 ntBASIC6.43□□□□□ -1.38
RFX1P22670 AC064862.4-201ENST00000442180 334 ntBASIC6.43□□□□□ -1.38
RFX1P22670 BX276092.4-201ENST00000452056 248 ntBASIC6.43□□□□□ -1.38
RFX1P22670 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.43□□□□□ -1.38
RFX1P22670 snoU109.4-201ENST00000458953 143 ntBASIC6.43□□□□□ -1.38
RFX1P22670 snoU13.29-201ENST00000459370 104 ntBASIC6.43□□□□□ -1.38
RFX1P22670 AC087385.1-201ENST00000475062 312 ntBASIC6.43□□□□□ -1.38
RFX1P22670 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 AC091885.1-201ENST00000506658 268 ntBASIC6.43□□□□□ -1.38
RFX1P22670 SCARNA18.1-201ENST00000516330 83 ntBASIC6.43□□□□□ -1.38
RFX1P22670 BTF3P12-201ENST00000519620 469 ntBASIC6.43□□□□□ -1.38
RFX1P22670 AC022790.1-201ENST00000522872 204 ntBASIC6.43□□□□□ -1.38
RFX1P22670 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.43□□□□□ -1.38
RFX1P22670 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.43□□□□□ -1.38
RFX1P22670 SETP7-201ENST00000552169 453 ntBASIC6.43□□□□□ -1.38
RFX1P22670 PSMA3P-201ENST00000555485 635 ntBASIC6.43□□□□□ -1.38
RFX1P22670 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.43□□□□□ -1.38
RFX1P22670 Y_RNA.812-201ENST00000610788 101 ntBASIC6.43□□□□□ -1.38
RFX1P22670 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.43□□□□□ -1.38
RFX1P22670 Y_RNA.784-201ENST00000613803 101 ntBASIC6.43□□□□□ -1.38
RFX1P22670 AC093913.1-201ENST00000614178 329 ntBASIC6.43□□□□□ -1.38
RFX1P22670 Y_RNA.787-201ENST00000616522 101 ntBASIC6.43□□□□□ -1.38
RFX1P22670 Y_RNA.780-201ENST00000617336 101 ntBASIC6.43□□□□□ -1.38
RFX1P22670 Y_RNA.801-201ENST00000619005 101 ntBASIC6.43□□□□□ -1.38
RFX1P22670 USP12-203ENST00000620323 349 ntTSL 3 BASIC6.43□□□□□ -1.38
RFX1P22670 AP001784.1-201ENST00000624107 428 ntBASIC6.43□□□□□ -1.38
RFX1P22670 MIR1302-1-201ENST00000637932 143 ntBASIC6.43□□□□□ -1.38
RFX1P22670 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
RFX1P22670 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
RFX1P22670 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
RFX1P22670 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
RFX1P22670 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.43□□□□□ -1.38
RFX1P22670 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RFX1P22670 AC012254.3-201ENST00000591183 2117 ntBASIC6.43□□□□□ -1.38
RFX1P22670 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFX1P22670 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFX1P22670 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFX1P22670 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFX1P22670 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFX1P22670 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.42□□□□□ -1.38
RFX1P22670 AL139276.1-201ENST00000311910 1001 ntBASIC6.42□□□□□ -1.38
RFX1P22670 RNA5SP110-201ENST00000362638 115 ntBASIC6.42□□□□□ -1.38
RFX1P22670 Y_RNA.67-201ENST00000362870 100 ntBASIC6.42□□□□□ -1.38
RFX1P22670 Y_RNA.162-201ENST00000363683 102 ntBASIC6.42□□□□□ -1.38
RFX1P22670 Y_RNA.419-201ENST00000384041 102 ntBASIC6.42□□□□□ -1.38
RFX1P22670 Y_RNA.431-201ENST00000384086 102 ntBASIC6.42□□□□□ -1.38
RFX1P22670 MIR105-2-201ENST00000385083 81 ntBASIC6.42□□□□□ -1.38
RFX1P22670 AL035660.1-201ENST00000422041 222 ntBASIC6.42□□□□□ -1.38
RFX1P22670 RPL23AP38-201ENST00000423801 469 ntBASIC6.42□□□□□ -1.38
RFX1P22670 OR2AS1P-201ENST00000427827 319 ntBASIC6.42□□□□□ -1.38
RFX1P22670 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.42□□□□□ -1.38
RFX1P22670 MTND1P18-201ENST00000448191 573 ntBASIC6.42□□□□□ -1.38
RFX1P22670 AC005077.1-201ENST00000449226 375 ntBASIC6.42□□□□□ -1.38
RFX1P22670 RPS26P39-201ENST00000469206 341 ntBASIC6.42□□□□□ -1.38
RFX1P22670 RPL7P19-201ENST00000469948 618 ntBASIC6.42□□□□□ -1.38
RFX1P22670 PFN1P6-201ENST00000476786 399 ntBASIC6.42□□□□□ -1.38
RFX1P22670 RPL5P22-201ENST00000480199 884 ntBASIC6.42□□□□□ -1.38
RFX1P22670 RPS23P1-201ENST00000491662 432 ntBASIC6.42□□□□□ -1.38
RFX1P22670 AC068305.1-201ENST00000497406 726 ntBASIC6.42□□□□□ -1.38
RFX1P22670 MTCO3P44-201ENST00000510977 541 ntBASIC6.42□□□□□ -1.38
RFX1P22670 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.42□□□□□ -1.38
RFX1P22670 RNA5SP362-201ENST00000516048 118 ntBASIC6.42□□□□□ -1.38
RFX1P22670 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.42□□□□□ -1.38
RFX1P22670 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.42□□□□□ -1.38
RFX1P22670 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.42□□□□□ -1.38
RFX1P22670 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.42□□□□□ -1.38
RFX1P22670 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.42□□□□□ -1.38
RFX1P22670 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.42□□□□□ -1.38
RFX1P22670 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms