Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHISA3A0PJX4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHISA3A0PJX4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHISA3A0PJX4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.07□□□□□ -1.6
SHISA3A0PJX4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.07□□□□□ -1.6
SHISA3A0PJX4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHISA3A0PJX4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 MTND5P1-201ENST00000445440 1375 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC121333.1-201ENST00000567488 2709 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC133552.1-201ENST00000569988 4007 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 RNA5SP326-201ENST00000363209 110 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 RNA5SP77-201ENST00000365394 120 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 RNU6-641P-201ENST00000384006 107 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AL592114.1-201ENST00000403842 483 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 RPS4XP9-201ENST00000405151 780 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 MIR548K-201ENST00000408406 116 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AL445928.1-201ENST00000435545 222 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 RPL12P49-201ENST00000441100 121 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 EEF1A1P1-201ENST00000447052 739 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC243772.1-201ENST00000451620 410 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 RNU7-59P-201ENST00000459101 61 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 snoU13.7-201ENST00000459220 104 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 FTH1P24-201ENST00000503502 462 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AP001804.3-201ENST00000525146 880 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 CYCSP25-201ENST00000525280 316 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC036111.2-201ENST00000533247 901 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AL359219.2-201ENST00000555184 348 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 HMGN2P47-201ENST00000559378 272 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 MIR4660-201ENST00000583549 74 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC245389.1-201ENST00000605141 529 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AL031666.3-201ENST00000609320 1006 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 7SK.10-201ENST00000621414 298 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC074140.1-201ENST00000621617 208 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AP000843.1-201ENST00000624880 701 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC091046.3-201ENST00000631455 1574 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 AC092376.2-201ENST00000622621 4116 ntBASIC5.06□□□□□ -1.6
SHISA3A0PJX4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.06□□□□□ -1.6
SHISA3A0PJX4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 MTND4P14-201ENST00000435799 1354 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 Y_RNA.197-201ENST00000364004 102 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 RNU6-1029P-201ENST00000384109 107 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 AL359643.1-201ENST00000404109 423 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 AC096921.1-201ENST00000411661 375 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 RPS4XP5-201ENST00000419038 768 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 RPL34P3-201ENST00000421454 338 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 RPL12P12-201ENST00000424633 501 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 AC108479.1-201ENST00000431142 427 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 RPL36AP6-201ENST00000435770 321 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 IPO7P1-201ENST00000442031 636 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 SNRPFP3-201ENST00000457792 225 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.05□□□□□ -1.6
SHISA3A0PJX4 MTND5P22-201ENST00000458380 195 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 RNU6-1208P-201ENST00000459588 107 ntBASIC5.05□□□□□ -1.6
SHISA3A0PJX4 AC079804.1-201ENST00000461922 436 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms