Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
ZC3H4Q9UPT8 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 MTND4P14-201ENST00000435799 1354 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 AP000432.2-201ENST00000624164 2048 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 RN7SKP44-201ENST00000363602 316 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 RNU1-77P-201ENST00000390868 162 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 RNA5SP339-201ENST00000390987 122 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 RPS4XP9-201ENST00000405151 780 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 MYL6P5-201ENST00000412707 459 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 AC243772.1-201ENST00000451620 410 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 SDC4P-201ENST00000453285 601 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 DHFRP3-201ENST00000455595 559 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 MTCO3P2-201ENST00000457365 171 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 BX284632.1-201ENST00000478218 541 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 AC012181.1-201ENST00000479895 423 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 RPL21P99-201ENST00000480369 423 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 MTCO1P29-201ENST00000496868 288 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 RNU6-273P-201ENST00000516937 96 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 RPL7P20-201ENST00000520308 745 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 AC115085.1-201ENST00000588924 229 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 AC012616.1-201ENST00000600294 197 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 AL022394.1-201ENST00000606979 292 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 AC130324.3-201ENST00000614165 542 ntBASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ZC3H4Q9UPT8 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ZC3H4Q9UPT8 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
ZC3H4Q9UPT8 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
ZC3H4Q9UPT8 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
ZC3H4Q9UPT8 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
ZC3H4Q9UPT8 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ZC3H4Q9UPT8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.96□□□□□ -1.29
ZC3H4Q9UPT8 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ZC3H4Q9UPT8 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
ZC3H4Q9UPT8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.96□□□□□ -1.29
ZC3H4Q9UPT8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 AC092692.1-201ENST00000623625 2595 ntBASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 RPS18P6-201ENST00000476880 458 ntBASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 AC114797.1-201ENST00000514003 728 ntBASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 Y_RNA.665-201ENST00000516177 98 ntBASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 AC068831.4-201ENST00000556118 109 ntBASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 AC244517.12-201ENST00000623581 663 ntBASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 AC011369.2-201ENST00000624423 1567 ntBASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ZC3H4Q9UPT8 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
ZC3H4Q9UPT8 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms