Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.58□□□□□ -1.68
AMBRA1Q9C0C7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.58□□□□□ -1.68
AMBRA1Q9C0C7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.58□□□□□ -1.68
AMBRA1Q9C0C7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
AMBRA1Q9C0C7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.58□□□□□ -1.68
AMBRA1Q9C0C7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AMBRA1Q9C0C7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
AMBRA1Q9C0C7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AMBRA1Q9C0C7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
AMBRA1Q9C0C7 A2MP1-204ENST00000566278 4130 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AL034370.1-201ENST00000397254 1590 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC107081.3-201ENST00000612715 2034 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 OR4G2P-201ENST00000328113 903 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 RNU6-1283P-201ENST00000365314 105 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 RNU6-441P-201ENST00000384545 106 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 RPS3AP23-201ENST00000401762 784 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AL356967.1-201ENST00000406305 431 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC093162.1-201ENST00000419682 124 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC092162.1-201ENST00000432828 434 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 ELOCP10-201ENST00000440624 327 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AL354714.3-201ENST00000447284 493 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 MTCO3P2-201ENST00000457365 171 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 KLF3P2-201ENST00000465138 268 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC017015.1-201ENST00000477387 286 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 FAM172BP-201ENST00000487497 1089 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 MTAPP1-201ENST00000489154 819 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC021146.3-201ENST00000511911 260 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 MED28P5-201ENST00000528254 438 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 DEFB108A-201ENST00000530110 222 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC013828.2-201ENST00000532487 235 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 HSPE1P3-201ENST00000559254 309 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC084757.1-201ENST00000559987 490 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 TPRKBP2-201ENST00000565969 475 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 MIR5697-201ENST00000578045 78 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 MIR3934-201ENST00000579806 107 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 OR4G1P-201ENST00000588632 938 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC006116.3-201ENST00000592968 361 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 ELOCP34-201ENST00000604436 327 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 HSPE1P14-201ENST00000605812 302 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC109347.2-201ENST00000610220 349 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC078899.5-201ENST00000612475 178 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AL049794.2-201ENST00000616301 365 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC108479.2-201ENST00000617314 601 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 U6.42-201ENST00000618440 107 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC005086.4-201ENST00000623065 213 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC099494.2-201ENST00000623371 978 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 OR5AK4P-201ENST00000635912 903 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 XPOTP1-201ENST00000443317 2398 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 SOCS5P3-201ENST00000425115 1576 ntBASIC4.57□□□□□ -1.68
AMBRA1Q9C0C7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms