Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 BX284668.6-201ENST00000606899 438 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 MIR6070-201ENST00000613967 103 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 DLEU2_2.2-201ENST00000615474 90 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC009951.1-201ENST00000623674 2614 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 AL662795.2-201ENST00000624252 3706 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 AC016745.2-201ENST00000608834 3443 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 RNA5SP429-201ENST00000363688 109 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 RNVU1-3-201ENST00000364313 161 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 Y_RNA.480-201ENST00000384364 102 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 RNA5SP280-201ENST00000411230 115 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 RNU2-22P-201ENST00000411266 212 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 RPS10P14-201ENST00000440748 502 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 AL354714.5-201ENST00000450131 590 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 AL390728.3-201ENST00000452704 270 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 AC026336.1-201ENST00000466577 351 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 RPL31P60-201ENST00000478450 367 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 RN7SL267P-201ENST00000485107 261 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 IGLC4-201ENST00000517690 248 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 AC069113.1-201ENST00000517763 267 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 RN7SL426P-201ENST00000579106 295 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 RNF138P2-201ENST00000603490 592 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 AL591516.1-201ENST00000611326 274 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 AC073488.3-201ENST00000631611 778 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 AL450472.1-202ENST00000637286 180 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.25□□□□□ -1.41
USB1Q9BQ65 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
USB1Q9BQ65 SHQ1P1-201ENST00000437111 1544 ntBASIC6.25□□□□□ -1.41
USB1Q9BQ65 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.24□□□□□ -1.41
USB1Q9BQ65 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.24□□□□□ -1.41
USB1Q9BQ65 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USB1Q9BQ65 Y_RNA.269-201ENST00000364685 89 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 Y_RNA.277-201ENST00000364754 102 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 RNU6-1303P-201ENST00000364841 107 ntBASIC6.24□□□□□ -1.41
USB1Q9BQ65 SNORA70.5-201ENST00000365519 135 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms